MOESM3 of Identification of genes and pathways potentially related to PHF20 by gene expression profile analysis of glioblastoma U87 cell line

MOESM3 of Integrative analysis of the cancer genome atlas and cancer cell lines encyclopedia large-scale genomic databases: MUC4/MUC16/MUC20 signature is associated with poor survival in human carcinomas

Nicolas Jonckheere (180288)
Isabelle Van Seuningen (158146)

September 2018

Additional file 3: Table S1. Ontology of genes correlated with MUC4 expression. Gene list was retrie...

Additional file 2 of A 35-gene signature discriminates between rapidly- and slowly-progressing glioblastoma multiforme and predicts survival in known subtypes of the cancer

Azeez A. Fatai (5055524)
Junaid Gamieldien (54547)

April 2018

Genes with high expression variance used in pathway enrichment analysis. (PDF 23.5 kb

Gene ontology (GO) enrichment analysis for differentially expressed genes.

Shuyan Ma (690922)
Li Qing (16548)
Xiaobo Yang (123393)
Guiqiang Liang (844543)
Li’e Zhang (844544)
Qin Li (36669)
Feng Xiong (306053)
Suwan Peng (844545)
Yifei Ma (206062)
Xiaowei Huang (111125)
Yunfeng Zou (188227)

January 2016

<p>GO analysis provides a controlled vocabulary to describe differentially expressed transcript attr...

Identification of genes and pathways potentially related to PHF20 by gene expression profile analysis of glioblastoma U87 cell line

Tianlong Liu
Tiejun Zhang
Feng Zhou
Jitao Wang
Xiaohu Zhai
Nan Mu
Jongsun Park
Minna Liu
Wenxing Liu
Peijin Shang
Yi Ding
Aidong Wen
Yuwen Li

October 2017

Abstract Background Glioblastoma is the most common and aggressive brain tumor associated with a poo...

MOESM3 of Bioinformatic gene analysis for potential biomarkers and therapeutic targets of atrial fibrillation-related stroke

Rongjun Zou (6332564)
Dingwen Zhang (6332570)
Lei Lv (169816)
Wanting Shi (6332579)
Zijiao Song (6332585)
Bin Yi (137660)
Bingjia Lai (6332588)
Qian Chen (18883)
Songran Yang (6332597)
Ping Hua (633016)

February 2019

Additional file 3: S3. Gene Ontology (GO) terms enrichment analysis of AF- and stroke-related differ...

MOESM1 of Multicellular gene network analysis identifies a macrophage-related gene signature predictive of therapeutic response and prognosis of gliomas

Xiaoqiang Sun (493308)
Xiaoping Liu (240534)
Mengxue Xia (6709025)
Yongzhao Shao (136605)
Xiaohua Zhang (350570)

May 2019

Additional file 1: Text S1. Detailed description of the methods. Table S1. Scheme of sample grouping...

Identification of Crucial Candidate Genes and Pathways in Glioblastoma Multiform by Bioinformatics Analysis

Ali Mohamed Alshabi
Basavaraj Vastrad
Ibrahim Ahmed Shaikh
Chanabasayya Vastrad

May 2019

The present study aimed to investigate the molecular mechanisms underlying glioblastoma multiform (G...

MOESM2 of Integration of transcriptome and proteome profiles in glioblastoma: looking for the missing link

Jean-Michel LemĂŠe (6001727)
Anne Clavreul (5899730)
Marc Aubry (87312)
Emmanuelle Com (180558)
Marie Tayrac (6001730)
Jean Mosser (65312)
Philippe Menei (128092)

November 2018

Additional file 2: Table S1. Differentially expressed probes between TZ and PBZ pooled samples trans...

MOESM3 of Integration of transcriptome and proteome profiles in glioblastoma: looking for the missing link

Jean-Michel LemĂŠe (6001727)
Anne Clavreul (5899730)
Marc Aubry (87312)
Emmanuelle Com (180558)
Marie Tayrac (6001730)
Jean Mosser (65312)
Philippe Menei (128092)

November 2018

Additional file 3: Table S2. List of altered biological processes in pooled GB transcriptomic and pr...

MOESM2 of Multicellular gene network analysis identifies a macrophage-related gene signature predictive of therapeutic response and prognosis of gliomas

Xiaoqiang Sun (493308)
Xiaoping Liu (240534)
Mengxue Xia (6709025)
Yongzhao Shao (136605)
Xiaohua Zhang (350570)

May 2019

Additional file 2: Table S2. Supplementary tables for the details of patient sample information from...

MOESM1 of Comprehensive bioinformatics analysis of acquired progesterone resistance in endometrial cancer cell line

Wenzhi Li (617452)
Shufen Wang (2464774)
Chunping Qiu (6110267)
Zhiming Liu (216751)
Qing Zhou (52712)
Deshui Kong (6409526)
Xiaohong Ma (462719)
Jie Jiang (187037)

February 2019

Additional file 1: Table S1. 821 differential expressed genes (DEGs) were identified from microarray...

MOESM3 of In situ characterization of stem cells-like biomarkers in meningiomas

Hanin Alamir (5290733)
Mona Alomari (5290730)
Abdulla Salwati (5290736)
Mohamad Saka (83948)
Mohammed Bangash (2620858)
Saleh Baeesa (4265287)
Fahad Alghamdi (4265296)
Angel Carracedo (3123957)
Hans-Juergen Schulten (706046)
Adeel Chaudhary (2620876)
Adel Abuzenadah (3149340)
Deema Hussein (2620873)

May 2018

Additional file 3: Table S2. Differentially expressed cancer driver genes [66] in individual tumors ...

Gene Ontology (GO) analysis of differentially expressed genes (DEGs) in GFP- and GFP-HuR-expressing FT293 cells.

Isabel Carrascoso (6069383)
José Alcalde (663073)
Daniel Tabas-Madrid (1538479)
Juan Carlos Oliveros (154360)
José M. Izquierdo (458864)

December 2018

(A-D) Top categories of biological processes associated with DEGs. (A) MA plot representations of th...

Additional file 5: of Transcriptomic and epigenetic profiling of ‘diffuse midline gliomas, H3 K27M-mutant’ discriminate two subgroups based on the type of histone H3 mutated and not supratentorial or infratentorial location

David Castel (3215397)
Cathy Philippe (65400)
Thomas Kergrohen (5933225)
Martin Sill (3474476)
Jane Merlevede (5933228)
Emilie Barret (5933231)
Stéphanie Puget (5649988)
Christian Sainte-Rose (181607)
Christof Kramm (483244)
Chris Jones (25458)
Pascale Varlet (181573)
Stefan Pfister (30190)
Jacques Grill (87832)
David Jones (43312)
Marie-Anne Debily (3019)

November 2018

Figure S2. Principal component analysis of the GE profile of 21 DIPG using the gene associated with ...

MOESM3 of Identification of a multidimensional transcriptome signature for survival prediction of postoperative glioblastoma multiforme patients

Wei-Zhen Gao (6109583)
Lie-Mei Guo (6109586)
Tian-Qi Xu (6109589)
Yu-Hua Yin (529786)
Feng Jia (2012230)

December 2018

Additional file 3: Table S3. 2328 genes co-expressed with the 11 molecular markers in the PCG-lncRNA...

MOESM3 of Integrative analysis of the cancer genome atlas and cancer cell lines encyclopedia large-scale genomic databases: MUC4/MUC16/MUC20 signature is associated with poor survival in human carcinomas

Nicolas Jonckheere (180288)
Isabelle Van Seuningen (158146)

September 2018

Additional file 3: Table S1. Ontology of genes correlated with MUC4 expression. Gene list was retrie...

Additional file 2 of A 35-gene signature discriminates between rapidly- and slowly-progressing glioblastoma multiforme and predicts survival in known subtypes of the cancer

Azeez A. Fatai (5055524)
Junaid Gamieldien (54547)

April 2018

Genes with high expression variance used in pathway enrichment analysis. (PDF 23.5 kb

Gene ontology (GO) enrichment analysis for differentially expressed genes.

Shuyan Ma (690922)
Li Qing (16548)
Xiaobo Yang (123393)
Guiqiang Liang (844543)
Li’e Zhang (844544)
Qin Li (36669)
Feng Xiong (306053)
Suwan Peng (844545)
Yifei Ma (206062)
Xiaowei Huang (111125)
Yunfeng Zou (188227)

January 2016

<p>GO analysis provides a controlled vocabulary to describe differentially expressed transcript attr...

Identification of genes and pathways potentially related to PHF20 by gene expression profile analysis of glioblastoma U87 cell line

Tianlong Liu
Tiejun Zhang
Feng Zhou
Jitao Wang
Xiaohu Zhai
Nan Mu
Jongsun Park
Minna Liu
Wenxing Liu
Peijin Shang
Yi Ding
Aidong Wen
Yuwen Li

October 2017

Abstract Background Glioblastoma is the most common and aggressive brain tumor associated with a poo...

MOESM3 of Bioinformatic gene analysis for potential biomarkers and therapeutic targets of atrial fibrillation-related stroke

Rongjun Zou (6332564)
Dingwen Zhang (6332570)
Lei Lv (169816)
Wanting Shi (6332579)
Zijiao Song (6332585)
Bin Yi (137660)
Bingjia Lai (6332588)
Qian Chen (18883)
Songran Yang (6332597)
Ping Hua (633016)

February 2019

Additional file 3: S3. Gene Ontology (GO) terms enrichment analysis of AF- and stroke-related differ...

MOESM1 of Multicellular gene network analysis identifies a macrophage-related gene signature predictive of therapeutic response and prognosis of gliomas

Xiaoqiang Sun (493308)
Xiaoping Liu (240534)
Mengxue Xia (6709025)
Yongzhao Shao (136605)
Xiaohua Zhang (350570)

May 2019

Additional file 1: Text S1. Detailed description of the methods. Table S1. Scheme of sample grouping...

Identification of Crucial Candidate Genes and Pathways in Glioblastoma Multiform by Bioinformatics Analysis

Ali Mohamed Alshabi
Basavaraj Vastrad
Ibrahim Ahmed Shaikh
Chanabasayya Vastrad

May 2019

The present study aimed to investigate the molecular mechanisms underlying glioblastoma multiform (G...

MOESM2 of Integration of transcriptome and proteome profiles in glioblastoma: looking for the missing link

Jean-Michel LemĂŠe (6001727)
Anne Clavreul (5899730)
Marc Aubry (87312)
Emmanuelle Com (180558)
Marie Tayrac (6001730)
Jean Mosser (65312)
Philippe Menei (128092)

November 2018

Additional file 2: Table S1. Differentially expressed probes between TZ and PBZ pooled samples trans...

MOESM3 of Integration of transcriptome and proteome profiles in glioblastoma: looking for the missing link

Jean-Michel LemĂŠe (6001727)
Anne Clavreul (5899730)
Marc Aubry (87312)
Emmanuelle Com (180558)
Marie Tayrac (6001730)
Jean Mosser (65312)
Philippe Menei (128092)

November 2018

Additional file 3: Table S2. List of altered biological processes in pooled GB transcriptomic and pr...

MOESM2 of Multicellular gene network analysis identifies a macrophage-related gene signature predictive of therapeutic response and prognosis of gliomas

Xiaoqiang Sun (493308)
Xiaoping Liu (240534)
Mengxue Xia (6709025)
Yongzhao Shao (136605)
Xiaohua Zhang (350570)

May 2019

Additional file 2: Table S2. Supplementary tables for the details of patient sample information from...

MOESM1 of Comprehensive bioinformatics analysis of acquired progesterone resistance in endometrial cancer cell line

Wenzhi Li (617452)
Shufen Wang (2464774)
Chunping Qiu (6110267)
Zhiming Liu (216751)
Qing Zhou (52712)
Deshui Kong (6409526)
Xiaohong Ma (462719)
Jie Jiang (187037)

February 2019

Additional file 1: Table S1. 821 differential expressed genes (DEGs) were identified from microarray...

MOESM3 of In situ characterization of stem cells-like biomarkers in meningiomas

Hanin Alamir (5290733)
Mona Alomari (5290730)
Abdulla Salwati (5290736)
Mohamad Saka (83948)
Mohammed Bangash (2620858)
Saleh Baeesa (4265287)
Fahad Alghamdi (4265296)
Angel Carracedo (3123957)
Hans-Juergen Schulten (706046)
Adeel Chaudhary (2620876)
Adel Abuzenadah (3149340)
Deema Hussein (2620873)

May 2018

Additional file 3: Table S2. Differentially expressed cancer driver genes [66] in individual tumors ...

Gene Ontology (GO) analysis of differentially expressed genes (DEGs) in GFP- and GFP-HuR-expressing FT293 cells.

Isabel Carrascoso (6069383)
José Alcalde (663073)
Daniel Tabas-Madrid (1538479)
Juan Carlos Oliveros (154360)
José M. Izquierdo (458864)

December 2018

(A-D) Top categories of biological processes associated with DEGs. (A) MA plot representations of th...

Additional file 5: of Transcriptomic and epigenetic profiling of ‘diffuse midline gliomas, H3 K27M-mutant’ discriminate two subgroups based on the type of histone H3 mutated and not supratentorial or infratentorial location

David Castel (3215397)
Cathy Philippe (65400)
Thomas Kergrohen (5933225)
Martin Sill (3474476)
Jane Merlevede (5933228)
Emilie Barret (5933231)
Stéphanie Puget (5649988)
Christian Sainte-Rose (181607)
Christof Kramm (483244)
Chris Jones (25458)
Pascale Varlet (181573)
Stefan Pfister (30190)
Jacques Grill (87832)
David Jones (43312)
Marie-Anne Debily (3019)

November 2018

Figure S2. Principal component analysis of the GE profile of 21 DIPG using the gene associated with ...

MOESM3 of Identification of a multidimensional transcriptome signature for survival prediction of postoperative glioblastoma multiforme patients

Wei-Zhen Gao (6109583)
Lie-Mei Guo (6109586)
Tian-Qi Xu (6109589)
Yu-Hua Yin (529786)
Feng Jia (2012230)

December 2018

Additional file 3: Table S3. 2328 genes co-expressed with the 11 molecular markers in the PCG-lncRNA...

MOESM3 of Integrative analysis of the cancer genome atlas and cancer cell lines encyclopedia large-scale genomic databases: MUC4/MUC16/MUC20 signature is associated with poor survival in human carcinomas

Nicolas Jonckheere (180288)
Isabelle Van Seuningen (158146)

September 2018

Additional file 3: Table S1. Ontology of genes correlated with MUC4 expression. Gene list was retrie...

Additional file 2 of A 35-gene signature discriminates between rapidly- and slowly-progressing glioblastoma multiforme and predicts survival in known subtypes of the cancer

Azeez A. Fatai (5055524)
Junaid Gamieldien (54547)

April 2018

Genes with high expression variance used in pathway enrichment analysis. (PDF 23.5 kb

Gene ontology (GO) enrichment analysis for differentially expressed genes.

Shuyan Ma (690922)
Li Qing (16548)
Xiaobo Yang (123393)
Guiqiang Liang (844543)
Li’e Zhang (844544)
Qin Li (36669)
Feng Xiong (306053)
Suwan Peng (844545)
Yifei Ma (206062)
Xiaowei Huang (111125)
Yunfeng Zou (188227)

January 2016

<p>GO analysis provides a controlled vocabulary to describe differentially expressed transcript attr...

MOESM3 of Identification of genes and pathways potentially related to PHF20 by gene expression profile analysis of glioblastoma U87 cell line

Abstract

Extracted data

MOESM3 of Identification of genes and pathways potentially related to PHF20 by gene expression profile analysis of glioblastoma U87 cell line

Abstract

Extracted data

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