Mapping of the Trichoderma spp. proteins against the CAZy database. (XLSX 172 kb
List of significant genes expressing Carbohydrate Active enzymes (CAZy) and associated genes with sa...
Table S7. List of differentially expressed carbohydrate-active enzymes (CAZyme) family genes. (XLSX ...
Datasets. Lists of proteins that constitute the negative, positive and evaluation datasets used for ...
Multiple sequence alignments used in the phylogenetic analysis of the GH55, AA9/GH61 and CE5 familie...
Table S1. Comparative analysis of PFAM domains associated to CAZYmes in Trichoderma spp. (XLSX 42Â k...
Table S2. Terpene synthase (TS), non-ribosomal peptide synthetase (NRPS), polyketide synthase (PKS) ...
Abstract Background Trichoderma harzianum is used in biotechnology applications due to its ability t...
Table S3. Trichoderma spp. and genomic sequences accession used in this study. (DOCX 13Â kb
Combines Additional file Tables S2–S4 (excel format). Table S2A. Numbers of putative genes per CAZy ...
The file contains gene coordinates of Trichoderma atrobrunneum ITEM 908. (GTF 26492Â kb
A table summarizing the proteins belonging to the xylan utilization systems in Pjdr2 as previously d...
Trichoderma atrobrunneum ITEM 908 protein sequences: the file contains the multifasta of the protein...
Combines Additional File Figures S1–S4 and Table S1. Figure S1: Hydrolytic enzyme activity profiles ...
Figure S1. The putative conidial pigment PKS gene clusters of Trichoderma spp. Numbers over the arro...
Table S1. Comparison of the number of enzymes involved in agar synthesis in the 6 species. (DOCX 26 ...
List of significant genes expressing Carbohydrate Active enzymes (CAZy) and associated genes with sa...
Table S7. List of differentially expressed carbohydrate-active enzymes (CAZyme) family genes. (XLSX ...
Datasets. Lists of proteins that constitute the negative, positive and evaluation datasets used for ...
Multiple sequence alignments used in the phylogenetic analysis of the GH55, AA9/GH61 and CE5 familie...
Table S1. Comparative analysis of PFAM domains associated to CAZYmes in Trichoderma spp. (XLSX 42Â k...
Table S2. Terpene synthase (TS), non-ribosomal peptide synthetase (NRPS), polyketide synthase (PKS) ...
Abstract Background Trichoderma harzianum is used in biotechnology applications due to its ability t...
Table S3. Trichoderma spp. and genomic sequences accession used in this study. (DOCX 13Â kb
Combines Additional file Tables S2–S4 (excel format). Table S2A. Numbers of putative genes per CAZy ...
The file contains gene coordinates of Trichoderma atrobrunneum ITEM 908. (GTF 26492Â kb
A table summarizing the proteins belonging to the xylan utilization systems in Pjdr2 as previously d...
Trichoderma atrobrunneum ITEM 908 protein sequences: the file contains the multifasta of the protein...
Combines Additional File Figures S1–S4 and Table S1. Figure S1: Hydrolytic enzyme activity profiles ...
Figure S1. The putative conidial pigment PKS gene clusters of Trichoderma spp. Numbers over the arro...
Table S1. Comparison of the number of enzymes involved in agar synthesis in the 6 species. (DOCX 26 ...
List of significant genes expressing Carbohydrate Active enzymes (CAZy) and associated genes with sa...
Table S7. List of differentially expressed carbohydrate-active enzymes (CAZyme) family genes. (XLSX ...
Datasets. Lists of proteins that constitute the negative, positive and evaluation datasets used for ...
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