Additional file 6: Table S5. of Identification of drought-responsive miRNAs and physiological characterization of tea plant (Camellia sinensis L.) under drought stress

Identification of drought-responsive miRNAs and physiological characterization of tea plant (Camellia sinensis L.) under drought stress

Yuqiong Guo
Shanshan Zhao
Chen Zhu
Xiaojun Chang
Chuan Yue
Zhong Wang
Yuling Lin
Zhongxiong Lai

November 2017

Abstract Background Drought stress is one of the major natural challenges in the main tea-producing ...

Additional file 18: of Integrated mRNA and microRNA analysis identifies genes and small miRNA molecules associated with transcriptional and post-transcriptional-level responses to both drought stress and re-watering treatment in tobacco

Qiansi Chen (3627278)
Meng Li (79487)
Zhongchun Zhang (3627287)
Weiwei Tie (3627290)
Xia Chen (299366)
Lifeng Jin (1892545)
Niu Zhai (3627284)
Qingxia Zheng (121332)
Jianfeng Zhang (219107)
Ran Wang (169166)
Guoyun Xu (3627281)
Hui Zhang (7197)
Pingping Liu (313822)
Huina Zhou (1892548)

January 2017

GO annotation of differentially expressed genes targeted by differentially expressed miRNAs. (JPG 20...

Additional file 15: of Integrated mRNA and microRNA analysis identifies genes and small miRNA molecules associated with transcriptional and post-transcriptional-level responses to both drought stress and re-watering treatment in tobacco

Qiansi Chen (3627278)
Meng Li (79487)
Zhongchun Zhang (3627287)
Weiwei Tie (3627290)
Xia Chen (299366)
Lifeng Jin (1892545)
Niu Zhai (3627284)
Qingxia Zheng (121332)
Jianfeng Zhang (219107)
Ran Wang (169166)
Guoyun Xu (3627281)
Hui Zhang (7197)
Pingping Liu (313822)
Huina Zhou (1892548)

January 2017

qRT-PCR relative gene expression analysis of miR398, miR390, miR162, miR166, and miR168. (PDF 340 kb

Additional file 4: Table S3. of Identification of drought-responsive miRNAs and physiological characterization of tea plant (Camellia sinensis L.) under drought stress

Yuqiong Guo (4605481)
Shanshan Zhao (1333206)
Chen Zhu (445894)
Xiaojun Chang (1592680)
Chuan Yue (3716722)
Zhong Wang (132073)
Yuling Lin (401495)
Zhongxiong Lai (401496)

November 2017

Camellia sinensisÂ known miRNAs differentially expressed between normal water supply and mild drough...

Additional file 11: Table S8. of Identification of drought-responsive miRNAs and physiological characterization of tea plant (Camellia sinensis L.) under drought stress

Yuqiong Guo (4605481)
Shanshan Zhao (1333206)
Chen Zhu (445894)
Xiaojun Chang (1592680)
Chuan Yue (3716722)
Zhong Wang (132073)
Yuling Lin (401495)
Zhongxiong Lai (401496)

November 2017

Top 20 KEGG pathways enriched inÂ Camellia sinensisÂ known miRNAs during drought stress. (XLS 167Â k...

Additional file 7: Figure S2. of Identification of drought-responsive miRNAs and physiological characterization of tea plant (Camellia sinensis L.) under drought stress

Yuqiong Guo (4605481)
Shanshan Zhao (1333206)
Chen Zhu (445894)
Xiaojun Chang (1592680)
Chuan Yue (3716722)
Zhong Wang (132073)
Yuling Lin (401495)
Zhongxiong Lai (401496)

November 2017

Gene Ontology annotations of predicted target genes of miRNAs identified from mild drought stress tr...

Additional file 12: Figure S4. of Identification of drought-responsive miRNAs and physiological characterization of tea plant (Camellia sinensis L.) under drought stress

Yuqiong Guo (4605481)
Shanshan Zhao (1333206)
Chen Zhu (445894)
Xiaojun Chang (1592680)
Chuan Yue (3716722)
Zhong Wang (132073)
Yuling Lin (401495)
Zhongxiong Lai (401496)

November 2017

Statistical summary of KEGG enriched pathways of top 20 target genes of novel miRNAs. (JPEG 5124Â kb

Additional file 3: Figure S1. of Identification of drought-responsive miRNAs and physiological characterization of tea plant (Camellia sinensis L.) under drought stress

Yuqiong Guo (4605481)
Shanshan Zhao (1333206)
Chen Zhu (445894)
Xiaojun Chang (1592680)
Chuan Yue (3716722)
Zhong Wang (132073)
Yuling Lin (401495)
Zhongxiong Lai (401496)

November 2017

Heat map of Camellia sinensis novel miRNAs differentially expressed between different drought stress...

Additional file 7: Table S2. of Transcriptome profiling of drought responsive noncoding RNAs and their target genes in rice

Pil Chung (3567242)
Harin Jung (105575)
Dong-Hoon Jeong (3567239)
Sun-Hwa Ha (123980)
Yang Choi (3567236)
Ju-Kon Kim (105576)

August 2016

Drought responsive precursor miRNAs and their expression patterns under well-watered and drought con...

Additional file 8: of Identification of four functionally important microRNA families with contrasting differential expression profiles between drought-tolerant and susceptible rice leaf at vegetative stage

Boon Cheah (3558509)
Kalaivani Nadarajah (3558515)
Mayur Divate (3558512)
Ratnam Wickneswari (117503)

September 2015

Differentially expressed known Oryza sativa miRNAs. (A) Conserved miRNA families and (B) Non- conser...

Additional file 6: of Identification of four functionally important microRNA families with contrasting differential expression profiles between drought-tolerant and susceptible rice leaf at vegetative stage

Boon Cheah (3558509)
Kalaivani Nadarajah (3558515)
Mayur Divate (3558512)
Ratnam Wickneswari (117503)

September 2015

Novel miRNA analysis. (A) Novel miRNA candidates identified to be conserved in at least two librarie...

Additional file 1: of Integrated mRNA and microRNA analysis identifies genes and small miRNA molecules associated with transcriptional and post-transcriptional-level responses to both drought stress and re-watering treatment in tobacco

Qiansi Chen (3627278)
Meng Li (79487)
Zhongchun Zhang (3627287)
Weiwei Tie (3627290)
Xia Chen (299366)
Lifeng Jin (1892545)
Niu Zhai (3627284)
Qingxia Zheng (121332)
Jianfeng Zhang (219107)
Ran Wang (169166)
Guoyun Xu (3627281)
Hui Zhang (7197)
Pingping Liu (313822)
Huina Zhou (1892548)

January 2017

List of differentially expressed genes between DL and CL (DL vs. CL) in tobacco leaves. (XLSX 151 kb

Additional file 4: of Identification of four functionally important microRNA families with contrasting differential expression profiles between drought-tolerant and susceptible rice leaf at vegetative stage

Boon Cheah (3558509)
Kalaivani Nadarajah (3558515)
Mayur Divate (3558512)
Ratnam Wickneswari (117503)

September 2015

Statistics of clean reads mapped to miRBase 21. Table shows the statistics of clean reads mapped to ...

Additional file 2: of Integrated mRNA and microRNA analysis identifies genes and small miRNA molecules associated with transcriptional and post-transcriptional-level responses to both drought stress and re-watering treatment in tobacco

Qiansi Chen (3627278)
Meng Li (79487)
Zhongchun Zhang (3627287)
Weiwei Tie (3627290)
Xia Chen (299366)
Lifeng Jin (1892545)
Niu Zhai (3627284)
Qingxia Zheng (121332)
Jianfeng Zhang (219107)
Ran Wang (169166)
Guoyun Xu (3627281)
Hui Zhang (7197)
Pingping Liu (313822)
Huina Zhou (1892548)

January 2017

List of differentially expressed genes between WL and DL (WL vs. DL) in tobacco leaves. (XLSX 118 kb

Additional file 5: of Identification of four functionally important microRNA families with contrasting differential expression profiles between drought-tolerant and susceptible rice leaf at vegetative stage

Boon Cheah (3558509)
Kalaivani Nadarajah (3558515)
Mayur Divate (3558512)
Ratnam Wickneswari (117503)

September 2015

The Solexa sequencing expression profile of known Oryza sativa mature miRNAs deposited in miRBase 21...

Identification of drought-responsive miRNAs and physiological characterization of tea plant (Camellia sinensis L.) under drought stress

Yuqiong Guo
Shanshan Zhao
Chen Zhu
Xiaojun Chang
Chuan Yue
Zhong Wang
Yuling Lin
Zhongxiong Lai

November 2017

Abstract Background Drought stress is one of the major natural challenges in the main tea-producing ...

Additional file 18: of Integrated mRNA and microRNA analysis identifies genes and small miRNA molecules associated with transcriptional and post-transcriptional-level responses to both drought stress and re-watering treatment in tobacco

Qiansi Chen (3627278)
Meng Li (79487)
Zhongchun Zhang (3627287)
Weiwei Tie (3627290)
Xia Chen (299366)
Lifeng Jin (1892545)
Niu Zhai (3627284)
Qingxia Zheng (121332)
Jianfeng Zhang (219107)
Ran Wang (169166)
Guoyun Xu (3627281)
Hui Zhang (7197)
Pingping Liu (313822)
Huina Zhou (1892548)

January 2017

GO annotation of differentially expressed genes targeted by differentially expressed miRNAs. (JPG 20...

Additional file 15: of Integrated mRNA and microRNA analysis identifies genes and small miRNA molecules associated with transcriptional and post-transcriptional-level responses to both drought stress and re-watering treatment in tobacco

Qiansi Chen (3627278)
Meng Li (79487)
Zhongchun Zhang (3627287)
Weiwei Tie (3627290)
Xia Chen (299366)
Lifeng Jin (1892545)
Niu Zhai (3627284)
Qingxia Zheng (121332)
Jianfeng Zhang (219107)
Ran Wang (169166)
Guoyun Xu (3627281)
Hui Zhang (7197)
Pingping Liu (313822)
Huina Zhou (1892548)

January 2017

qRT-PCR relative gene expression analysis of miR398, miR390, miR162, miR166, and miR168. (PDF 340 kb

Additional file 4: Table S3. of Identification of drought-responsive miRNAs and physiological characterization of tea plant (Camellia sinensis L.) under drought stress

Yuqiong Guo (4605481)
Shanshan Zhao (1333206)
Chen Zhu (445894)
Xiaojun Chang (1592680)
Chuan Yue (3716722)
Zhong Wang (132073)
Yuling Lin (401495)
Zhongxiong Lai (401496)

November 2017

Camellia sinensisÂ known miRNAs differentially expressed between normal water supply and mild drough...

Additional file 11: Table S8. of Identification of drought-responsive miRNAs and physiological characterization of tea plant (Camellia sinensis L.) under drought stress

Yuqiong Guo (4605481)
Shanshan Zhao (1333206)
Chen Zhu (445894)
Xiaojun Chang (1592680)
Chuan Yue (3716722)
Zhong Wang (132073)
Yuling Lin (401495)
Zhongxiong Lai (401496)

November 2017

Top 20 KEGG pathways enriched inÂ Camellia sinensisÂ known miRNAs during drought stress. (XLS 167Â k...

Additional file 7: Figure S2. of Identification of drought-responsive miRNAs and physiological characterization of tea plant (Camellia sinensis L.) under drought stress

Yuqiong Guo (4605481)
Shanshan Zhao (1333206)
Chen Zhu (445894)
Xiaojun Chang (1592680)
Chuan Yue (3716722)
Zhong Wang (132073)
Yuling Lin (401495)
Zhongxiong Lai (401496)

November 2017

Gene Ontology annotations of predicted target genes of miRNAs identified from mild drought stress tr...

Additional file 12: Figure S4. of Identification of drought-responsive miRNAs and physiological characterization of tea plant (Camellia sinensis L.) under drought stress

Yuqiong Guo (4605481)
Shanshan Zhao (1333206)
Chen Zhu (445894)
Xiaojun Chang (1592680)
Chuan Yue (3716722)
Zhong Wang (132073)
Yuling Lin (401495)
Zhongxiong Lai (401496)

November 2017

Statistical summary of KEGG enriched pathways of top 20 target genes of novel miRNAs. (JPEG 5124Â kb

Additional file 3: Figure S1. of Identification of drought-responsive miRNAs and physiological characterization of tea plant (Camellia sinensis L.) under drought stress

Yuqiong Guo (4605481)
Shanshan Zhao (1333206)
Chen Zhu (445894)
Xiaojun Chang (1592680)
Chuan Yue (3716722)
Zhong Wang (132073)
Yuling Lin (401495)
Zhongxiong Lai (401496)

November 2017

Heat map of Camellia sinensis novel miRNAs differentially expressed between different drought stress...

Additional file 7: Table S2. of Transcriptome profiling of drought responsive noncoding RNAs and their target genes in rice

Pil Chung (3567242)
Harin Jung (105575)
Dong-Hoon Jeong (3567239)
Sun-Hwa Ha (123980)
Yang Choi (3567236)
Ju-Kon Kim (105576)

August 2016

Drought responsive precursor miRNAs and their expression patterns under well-watered and drought con...

Additional file 8: of Identification of four functionally important microRNA families with contrasting differential expression profiles between drought-tolerant and susceptible rice leaf at vegetative stage

Boon Cheah (3558509)
Kalaivani Nadarajah (3558515)
Mayur Divate (3558512)
Ratnam Wickneswari (117503)

September 2015

Differentially expressed known Oryza sativa miRNAs. (A) Conserved miRNA families and (B) Non- conser...

Additional file 6: of Identification of four functionally important microRNA families with contrasting differential expression profiles between drought-tolerant and susceptible rice leaf at vegetative stage

Boon Cheah (3558509)
Kalaivani Nadarajah (3558515)
Mayur Divate (3558512)
Ratnam Wickneswari (117503)

September 2015

Novel miRNA analysis. (A) Novel miRNA candidates identified to be conserved in at least two librarie...

Additional file 1: of Integrated mRNA and microRNA analysis identifies genes and small miRNA molecules associated with transcriptional and post-transcriptional-level responses to both drought stress and re-watering treatment in tobacco

Qiansi Chen (3627278)
Meng Li (79487)
Zhongchun Zhang (3627287)
Weiwei Tie (3627290)
Xia Chen (299366)
Lifeng Jin (1892545)
Niu Zhai (3627284)
Qingxia Zheng (121332)
Jianfeng Zhang (219107)
Ran Wang (169166)
Guoyun Xu (3627281)
Hui Zhang (7197)
Pingping Liu (313822)
Huina Zhou (1892548)

January 2017

List of differentially expressed genes between DL and CL (DL vs. CL) in tobacco leaves. (XLSX 151 kb

Additional file 4: of Identification of four functionally important microRNA families with contrasting differential expression profiles between drought-tolerant and susceptible rice leaf at vegetative stage

Boon Cheah (3558509)
Kalaivani Nadarajah (3558515)
Mayur Divate (3558512)
Ratnam Wickneswari (117503)

September 2015

Statistics of clean reads mapped to miRBase 21. Table shows the statistics of clean reads mapped to ...

Additional file 2: of Integrated mRNA and microRNA analysis identifies genes and small miRNA molecules associated with transcriptional and post-transcriptional-level responses to both drought stress and re-watering treatment in tobacco

Qiansi Chen (3627278)
Meng Li (79487)
Zhongchun Zhang (3627287)
Weiwei Tie (3627290)
Xia Chen (299366)
Lifeng Jin (1892545)
Niu Zhai (3627284)
Qingxia Zheng (121332)
Jianfeng Zhang (219107)
Ran Wang (169166)
Guoyun Xu (3627281)
Hui Zhang (7197)
Pingping Liu (313822)
Huina Zhou (1892548)

January 2017

List of differentially expressed genes between WL and DL (WL vs. DL) in tobacco leaves. (XLSX 118 kb

Additional file 5: of Identification of four functionally important microRNA families with contrasting differential expression profiles between drought-tolerant and susceptible rice leaf at vegetative stage

Boon Cheah (3558509)
Kalaivani Nadarajah (3558515)
Mayur Divate (3558512)
Ratnam Wickneswari (117503)

September 2015

The Solexa sequencing expression profile of known Oryza sativa mature miRNAs deposited in miRBase 21...

Identification of drought-responsive miRNAs and physiological characterization of tea plant (Camellia sinensis L.) under drought stress

Yuqiong Guo
Shanshan Zhao
Chen Zhu
Xiaojun Chang
Chuan Yue
Zhong Wang
Yuling Lin
Zhongxiong Lai

November 2017

Abstract Background Drought stress is one of the major natural challenges in the main tea-producing ...

Additional file 18: of Integrated mRNA and microRNA analysis identifies genes and small miRNA molecules associated with transcriptional and post-transcriptional-level responses to both drought stress and re-watering treatment in tobacco

Qiansi Chen (3627278)
Meng Li (79487)
Zhongchun Zhang (3627287)
Weiwei Tie (3627290)
Xia Chen (299366)
Lifeng Jin (1892545)
Niu Zhai (3627284)
Qingxia Zheng (121332)
Jianfeng Zhang (219107)
Ran Wang (169166)
Guoyun Xu (3627281)
Hui Zhang (7197)
Pingping Liu (313822)
Huina Zhou (1892548)

January 2017

GO annotation of differentially expressed genes targeted by differentially expressed miRNAs. (JPG 20...

Additional file 15: of Integrated mRNA and microRNA analysis identifies genes and small miRNA molecules associated with transcriptional and post-transcriptional-level responses to both drought stress and re-watering treatment in tobacco

Qiansi Chen (3627278)
Meng Li (79487)
Zhongchun Zhang (3627287)
Weiwei Tie (3627290)
Xia Chen (299366)
Lifeng Jin (1892545)
Niu Zhai (3627284)
Qingxia Zheng (121332)
Jianfeng Zhang (219107)
Ran Wang (169166)
Guoyun Xu (3627281)
Hui Zhang (7197)
Pingping Liu (313822)
Huina Zhou (1892548)

January 2017

qRT-PCR relative gene expression analysis of miR398, miR390, miR162, miR166, and miR168. (PDF 340 kb

Additional file 6: Table S5. of Identification of drought-responsive miRNAs and physiological characterization of tea plant (Camellia sinensis L.) under drought stress

Abstract

Extracted data

Additional file 6: Table S5. of Identification of drought-responsive miRNAs and physiological characterization of tea plant (Camellia sinensis L.) under drought stress

Abstract

Extracted data

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