Additional file 4: Table S4. of Identification and characterization of Prunus persica miRNAs in response to UVB radiation in greenhouse through high-throughput sequencing

Additional file 4: of Identification and expression profiles of sRNAs and their biogenesis and action-related genes in male and female cones of Pinus tabuliformis

Shi-Hui Niu (3416186)
Chang Liu (35901)
Hu-Wei Yuan (3416189)
Pei Li (411972)
Yue Li (102191)
Wei Li (7081)

September 2015

The differentially expressed miRNAs in male and female cones of P. tabuliformis. (DOCX 27Â kb

Additional file 8: of MicroRNA profiling analysis of developing berries for âKyohoâ and its early-ripening mutant during berry ripening

Da-Long Guo (3512159)
Qiong Li (346270)
Wen-Qing Lv (5983820)
Guo-Hai Zhang (1637623)
Yi-He Yu (3512156)

November 2018

Figure S3. GO categories and distribution of miRNA targets gene of all the miRNAs identified in this...

Additional file 9: Table S5. of Cold-responsive miRNAs and their target genes in the wild eggplant species Solanum aculeatissimum

Xu Yang (112496)
Fei Liu (21082)
Yu Zhang (12946)
Lu Wang (45927)
Yu-fu Cheng (4726893)

December 2017

Functional analysis of miRNA and target genes in eggplant. GO enrichment analysis of the functions o...

Additional file 3: Table S3. of Identification and characterization of Prunus persica miRNAs in response to UVB radiation in greenhouse through high-throughput sequencing

Shaoxuan Li (4638532)
Zhanru Shao (565105)
Xiling Fu (4638529)
Wei Xiao (16583)
Ling Li (38566)
Ming Chen (115604)
Mingyue Sun (4638535)
Dongmei Li (176178)
Dongsheng Gao (708851)

December 2017

Details of targets genes and their annotation, GO classification, and KEGG pathway for the known miR...

Additional file 2: Table S2. of Identification and characterization of Prunus persica miRNAs in response to UVB radiation in greenhouse through high-throughput sequencing

Shaoxuan Li (4638532)
Zhanru Shao (565105)
Xiling Fu (4638529)
Wei Xiao (16583)
Ling Li (38566)
Ming Chen (115604)
Mingyue Sun (4638535)
Dongmei Li (176178)
Dongsheng Gao (708851)

December 2017

The summary of novel miRNAs prediction and expression in control and UVB supplement libraries. (PDF ...

Additional file 4: Table S3. of Exploring miRNAs involved in blue/UV-A light response in Brassica rapa reveals special regulatory mode during seedling development

Bo Zhou (15092)
Pengzhen Fan (3523733)
Yuhua Li (52681)
Haifang Yan (3523730)
Qijiang Xu (3523736)

May 2016

List of conserved and novel miRNAs that are differentially expressed in Brassica rapa turnip seeding...

Additional file 1: Figure S1. of Exploring miRNAs involved in blue/UV-A light response in Brassica rapa reveals special regulatory mode during seedling development

Bo Zhou (15092)
Pengzhen Fan (3523733)
Yuhua Li (52681)
Haifang Yan (3523730)
Qijiang Xu (3523736)

May 2016

Length distribution and abundance of the sRNA sequences in Brassica rapa subsp. rapa cv. Tsuda seedl...

Identification and characterization of Prunus persica miRNAs in response to UVB radiation in greenhouse through high-throughput sequencing

Shaoxuan Li
Zhanru Shao
Xiling Fu
Wei Xiao
Ling Li
Ming Chen
Mingyue Sun
Dongmei Li
Dongsheng Gao

December 2017

Abstract Background MicroRNAs (miRNAs) are small non-coding RNAs that regulate gene expression of ta...

Additional file 3: Table S4. of Identification of miRNAs and their targets through high-throughput sequencing and degradome analysis in male and female Asparagus officinalis

Jingli Chen (600614)
Yi Zheng (113896)
Li Qin (205731)
Yan Wang (15435)
Lifei Chen (600615)
Yanjun He (600613)
Zhangjun Fei (14143)
Gang Lu (19958)

April 2016

Target genes of miRNAs identified in asparagus using high-throughput degradome sequencing analysis. ...

Additional file 1: of MicroRNAs and their targets in cucumber shoot apices in response to temperature and photoperiod

Xiaohui Zhang (81778)
Yunsong Lai (2557420)
Wei Zhang (405)
Jalil Ahmad (5980487)
Yang Qiu (368797)
Xiaoxue Zhang (1755322)
Mengmeng Duan (3596504)
Tongjin Liu (5980490)
Jiangping Song (413328)
Haiping Wang (318650)
Xixiang Li (128220)

November 2018

Table S1. summary of sRNA sequencing data. Table S2. summary of known miRNAs. Table S3. summary of n...

Additional file 8: of Identification of microRNAs associated with the exogenous spermidine-mediated improvement of high-temperature tolerance in cucumber seedlings (Cucumis sativus L.)

Ying Wang (11406)
Shirong Guo (5141009)
Lei Wang (6656)
Liwei Wang (165815)
Xueying He (2194399)
Sheng Shu (5141012)
Jin Sun (117866)
Na Lu (325317)

April 2018

Table S7. The KEGG metabolic pathways of gene candidates targeted by miRNAs responding to high-tempe...

Additional file 1: of Identification and characterisation of microRNAs and their target genes in phosphate-starved Nicotiana benthamiana by small RNA deep sequencing and 5âRACE analysis

Amanda Huen (6093488)
Julia Bally (204199)
Penelope Smith (3196053)

December 2018

Table S1. Microsoft Excel Worksheet (.xlsx). sRNA deep sequencing read matches to predicted pri-miRN...

Additional file 4: Table S3. of Genome-wide identification of microRNAs in pomegranate (Punica granatum L.) by high-throughput sequencing

Thangasamy Saminathan (1541002)
Abiodun Bodunrin (3513986)
Nripendra Singh (3513980)
Ramajayam Devarajan (3513989)
Padma Nimmakayala (514885)
Moersfelder Jeff (3513992)
Mallikarjuna Aradhya (3252891)
Umesh Reddy (3513983)

May 2016

List of novel miRNAs, their precursors with hairpin structure sequences. (XLSX 10Â kb

Additional file 4: Table S3. of Genome-wide expression profiling of microRNAs in poplar upon infection with the foliar rust fungus Melampsora larici-populina

Min Chen (147733)
Zhimin Cao (3429407)

September 2015

Differentially expressed miRNAs from P. szechuanica and target gene functional annotations. (XLSX 31...

Additional file 1: of Analysis of Brachypodium miRNA targets: evidence for diverse control during stress and conservation in bioenergy crops

Karl Franke (5541998)
Skye Schmidt (5541995)
Sunhee Park (1700167)
Dong-Hoon Jeong (3567239)
Monica Accerbi (5541992)
Pamela Green (5195390)

July 2018

Table S1. RNAseq Libraries. Summary statistics of Brachypodium RNAseq libraries. Table S2. BDI Promi...

Additional file 4: of Identification and expression profiles of sRNAs and their biogenesis and action-related genes in male and female cones of Pinus tabuliformis

Shi-Hui Niu (3416186)
Chang Liu (35901)
Hu-Wei Yuan (3416189)
Pei Li (411972)
Yue Li (102191)
Wei Li (7081)

September 2015

The differentially expressed miRNAs in male and female cones of P. tabuliformis. (DOCX 27Â kb

Additional file 8: of MicroRNA profiling analysis of developing berries for âKyohoâ and its early-ripening mutant during berry ripening

Da-Long Guo (3512159)
Qiong Li (346270)
Wen-Qing Lv (5983820)
Guo-Hai Zhang (1637623)
Yi-He Yu (3512156)

November 2018

Figure S3. GO categories and distribution of miRNA targets gene of all the miRNAs identified in this...

Additional file 9: Table S5. of Cold-responsive miRNAs and their target genes in the wild eggplant species Solanum aculeatissimum

Xu Yang (112496)
Fei Liu (21082)
Yu Zhang (12946)
Lu Wang (45927)
Yu-fu Cheng (4726893)

December 2017

Functional analysis of miRNA and target genes in eggplant. GO enrichment analysis of the functions o...

Additional file 3: Table S3. of Identification and characterization of Prunus persica miRNAs in response to UVB radiation in greenhouse through high-throughput sequencing

Shaoxuan Li (4638532)
Zhanru Shao (565105)
Xiling Fu (4638529)
Wei Xiao (16583)
Ling Li (38566)
Ming Chen (115604)
Mingyue Sun (4638535)
Dongmei Li (176178)
Dongsheng Gao (708851)

December 2017

Details of targets genes and their annotation, GO classification, and KEGG pathway for the known miR...

Additional file 2: Table S2. of Identification and characterization of Prunus persica miRNAs in response to UVB radiation in greenhouse through high-throughput sequencing

Shaoxuan Li (4638532)
Zhanru Shao (565105)
Xiling Fu (4638529)
Wei Xiao (16583)
Ling Li (38566)
Ming Chen (115604)
Mingyue Sun (4638535)
Dongmei Li (176178)
Dongsheng Gao (708851)

December 2017

The summary of novel miRNAs prediction and expression in control and UVB supplement libraries. (PDF ...

Additional file 4: Table S3. of Exploring miRNAs involved in blue/UV-A light response in Brassica rapa reveals special regulatory mode during seedling development

Bo Zhou (15092)
Pengzhen Fan (3523733)
Yuhua Li (52681)
Haifang Yan (3523730)
Qijiang Xu (3523736)

May 2016

List of conserved and novel miRNAs that are differentially expressed in Brassica rapa turnip seeding...

Additional file 1: Figure S1. of Exploring miRNAs involved in blue/UV-A light response in Brassica rapa reveals special regulatory mode during seedling development

Bo Zhou (15092)
Pengzhen Fan (3523733)
Yuhua Li (52681)
Haifang Yan (3523730)
Qijiang Xu (3523736)

May 2016

Length distribution and abundance of the sRNA sequences in Brassica rapa subsp. rapa cv. Tsuda seedl...

Identification and characterization of Prunus persica miRNAs in response to UVB radiation in greenhouse through high-throughput sequencing

Shaoxuan Li
Zhanru Shao
Xiling Fu
Wei Xiao
Ling Li
Ming Chen
Mingyue Sun
Dongmei Li
Dongsheng Gao

December 2017

Abstract Background MicroRNAs (miRNAs) are small non-coding RNAs that regulate gene expression of ta...

Additional file 3: Table S4. of Identification of miRNAs and their targets through high-throughput sequencing and degradome analysis in male and female Asparagus officinalis

Jingli Chen (600614)
Yi Zheng (113896)
Li Qin (205731)
Yan Wang (15435)
Lifei Chen (600615)
Yanjun He (600613)
Zhangjun Fei (14143)
Gang Lu (19958)

April 2016

Target genes of miRNAs identified in asparagus using high-throughput degradome sequencing analysis. ...

Additional file 1: of MicroRNAs and their targets in cucumber shoot apices in response to temperature and photoperiod

Xiaohui Zhang (81778)
Yunsong Lai (2557420)
Wei Zhang (405)
Jalil Ahmad (5980487)
Yang Qiu (368797)
Xiaoxue Zhang (1755322)
Mengmeng Duan (3596504)
Tongjin Liu (5980490)
Jiangping Song (413328)
Haiping Wang (318650)
Xixiang Li (128220)

November 2018

Table S1. summary of sRNA sequencing data. Table S2. summary of known miRNAs. Table S3. summary of n...

Additional file 8: of Identification of microRNAs associated with the exogenous spermidine-mediated improvement of high-temperature tolerance in cucumber seedlings (Cucumis sativus L.)

Ying Wang (11406)
Shirong Guo (5141009)
Lei Wang (6656)
Liwei Wang (165815)
Xueying He (2194399)
Sheng Shu (5141012)
Jin Sun (117866)
Na Lu (325317)

April 2018

Table S7. The KEGG metabolic pathways of gene candidates targeted by miRNAs responding to high-tempe...

Additional file 1: of Identification and characterisation of microRNAs and their target genes in phosphate-starved Nicotiana benthamiana by small RNA deep sequencing and 5âRACE analysis

Amanda Huen (6093488)
Julia Bally (204199)
Penelope Smith (3196053)

December 2018

Table S1. Microsoft Excel Worksheet (.xlsx). sRNA deep sequencing read matches to predicted pri-miRN...

Additional file 4: Table S3. of Genome-wide identification of microRNAs in pomegranate (Punica granatum L.) by high-throughput sequencing

Thangasamy Saminathan (1541002)
Abiodun Bodunrin (3513986)
Nripendra Singh (3513980)
Ramajayam Devarajan (3513989)
Padma Nimmakayala (514885)
Moersfelder Jeff (3513992)
Mallikarjuna Aradhya (3252891)
Umesh Reddy (3513983)

May 2016

List of novel miRNAs, their precursors with hairpin structure sequences. (XLSX 10Â kb

Additional file 4: Table S3. of Genome-wide expression profiling of microRNAs in poplar upon infection with the foliar rust fungus Melampsora larici-populina

Min Chen (147733)
Zhimin Cao (3429407)

September 2015

Differentially expressed miRNAs from P. szechuanica and target gene functional annotations. (XLSX 31...

Additional file 1: of Analysis of Brachypodium miRNA targets: evidence for diverse control during stress and conservation in bioenergy crops

Karl Franke (5541998)
Skye Schmidt (5541995)
Sunhee Park (1700167)
Dong-Hoon Jeong (3567239)
Monica Accerbi (5541992)
Pamela Green (5195390)

July 2018

Table S1. RNAseq Libraries. Summary statistics of Brachypodium RNAseq libraries. Table S2. BDI Promi...

Additional file 4: of Identification and expression profiles of sRNAs and their biogenesis and action-related genes in male and female cones of Pinus tabuliformis

Shi-Hui Niu (3416186)
Chang Liu (35901)
Hu-Wei Yuan (3416189)
Pei Li (411972)
Yue Li (102191)
Wei Li (7081)

September 2015

The differentially expressed miRNAs in male and female cones of P. tabuliformis. (DOCX 27Â kb

Additional file 8: of MicroRNA profiling analysis of developing berries for âKyohoâ and its early-ripening mutant during berry ripening

Da-Long Guo (3512159)
Qiong Li (346270)
Wen-Qing Lv (5983820)
Guo-Hai Zhang (1637623)
Yi-He Yu (3512156)

November 2018

Figure S3. GO categories and distribution of miRNA targets gene of all the miRNAs identified in this...

Additional file 9: Table S5. of Cold-responsive miRNAs and their target genes in the wild eggplant species Solanum aculeatissimum

Xu Yang (112496)
Fei Liu (21082)
Yu Zhang (12946)
Lu Wang (45927)
Yu-fu Cheng (4726893)

December 2017

Functional analysis of miRNA and target genes in eggplant. GO enrichment analysis of the functions o...

Additional file 4: Table S4. of Identification and characterization of Prunus persica miRNAs in response to UVB radiation in greenhouse through high-throughput sequencing

Abstract

Extracted data

Additional file 4: Table S4. of Identification and characterization of Prunus persica miRNAs in response to UVB radiation in greenhouse through high-throughput sequencing

Abstract

Extracted data

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