<p>Differential expression of genes in the cell cycle pathway (hsa04110, upper panel) and DNA replication (hsa03030, lower panel) for COL6-RD dominant negative vs. null (lower panel). Log<sub>2</sub> fold change is plotted for each gene in the pathway (positive values reflect increased expression in the dominant negative mutants). Genes with significant differential expression (FDR-adjusted p-value was <0.05) are marked with an *.</p
<p>Top genes that decrease (- log2) or increase (+ log2) in ZNF804A KD cells. TPM (transcripts per m...
<p>A: Differentially expressed genes at FDR 0.05 (highlighted in red) between non-involuted and invo...
<p>(a) Examples of differential expression analysis results for the genes <i>HCST</i> and <i>IRF4</i...
<p>The fold change in the expression of each gene is plotted against mean gene expression. Red point...
*<p>Negative sign represent that genes are down regulated while others are up-regulated in between a...
<p>(A) Pathway analysis of upregulated genes modulated by FTO overexpression. (B) Pathway analysis o...
<p>The diagram depicts up-regulated genes that were differentially expressed (p<0.05) in day 4 vs. 1...
1<p>Spearman rank correlation coefficient between fold change expression and fold change mutant abun...
<p>This plot depicts fold change vs. mean expression. Points depict genes, with red indicating those...
<p>Differentially regulated genes annotated as cell-cycle associatedFold change.</p
<p>A negative log2 Fold Change (FC) value means that the gene showed higher expression in control tr...
Comparisons were performed to determine differential expression values of selected genes in Fig 9 co...
<p>Notes: + presents up-regulation, − indicates down-regulation.</p><p>Differential expression genes...
<p>The differentially expressed genes were identified with the criteria (twofold or more change and ...
<p>HeNC2 cells were activated with LTA, Hb, LTA plus Hb or maintained in medium alone and RNA was ob...
<p>Top genes that decrease (- log2) or increase (+ log2) in ZNF804A KD cells. TPM (transcripts per m...
<p>A: Differentially expressed genes at FDR 0.05 (highlighted in red) between non-involuted and invo...
<p>(a) Examples of differential expression analysis results for the genes <i>HCST</i> and <i>IRF4</i...
<p>The fold change in the expression of each gene is plotted against mean gene expression. Red point...
*<p>Negative sign represent that genes are down regulated while others are up-regulated in between a...
<p>(A) Pathway analysis of upregulated genes modulated by FTO overexpression. (B) Pathway analysis o...
<p>The diagram depicts up-regulated genes that were differentially expressed (p<0.05) in day 4 vs. 1...
1<p>Spearman rank correlation coefficient between fold change expression and fold change mutant abun...
<p>This plot depicts fold change vs. mean expression. Points depict genes, with red indicating those...
<p>Differentially regulated genes annotated as cell-cycle associatedFold change.</p
<p>A negative log2 Fold Change (FC) value means that the gene showed higher expression in control tr...
Comparisons were performed to determine differential expression values of selected genes in Fig 9 co...
<p>Notes: + presents up-regulation, − indicates down-regulation.</p><p>Differential expression genes...
<p>The differentially expressed genes were identified with the criteria (twofold or more change and ...
<p>HeNC2 cells were activated with LTA, Hb, LTA plus Hb or maintained in medium alone and RNA was ob...
<p>Top genes that decrease (- log2) or increase (+ log2) in ZNF804A KD cells. TPM (transcripts per m...
<p>A: Differentially expressed genes at FDR 0.05 (highlighted in red) between non-involuted and invo...
<p>(a) Examples of differential expression analysis results for the genes <i>HCST</i> and <i>IRF4</i...