Additional file 8: Table S4. of Whole genome sequencing of the monomorphic pathogen Mycobacterium bovis reveals local differentiation of cattle clinical isolates

Data_Sheet_2_Genomic analysis of Mycobacterium tuberculosis variant bovis strains isolated from bovine in the state of Mato Grosso, Brazil.PDF

Taís Ramalho dos Anjos (14125710)
Vinícius Silva Castro (14125713)
Edson Silva Machado Filho (14125716)
Philip Noel Suffys (10350779)
Harrison Magdinier Gomes (3122343)
Rafael Silva Duarte (10350776)
Eduardo Eustáquio de Souza Figueiredo (3122319)
Ricardo César Tavares Carvalho (3122337)

November 2022

The species Mycobacterium tuberculosis variant bovis (M. tuberculosis var. bovis) is associated with...

Data_Sheet_3_Genomic analysis of Mycobacterium tuberculosis variant bovis strains isolated from bovine in the state of Mato Grosso, Brazil.PDF

Taís Ramalho dos Anjos (14125710)
Vinícius Silva Castro (14125713)
Edson Silva Machado Filho (14125716)
Philip Noel Suffys (10350779)
Harrison Magdinier Gomes (3122343)
Rafael Silva Duarte (10350776)
Eduardo Eustáquio de Souza Figueiredo (3122319)
Ricardo César Tavares Carvalho (3122337)

November 2022

The species Mycobacterium tuberculosis variant bovis (M. tuberculosis var. bovis) is associated with...

Whole Genome Sequence Analysis of Mycobacterium bovis Cattle Isolates, Algeria

Tazerart, Fatah
Saad, Jamal
Sahraoui, Naima
Yala, Djamel
Niar, Abdellatif
Drancourt, Michel

July 2021

International audienceMycobacterium bovis (M. bovis), a Mycobacterium tuberculosis complex species r...

Additional file 9: Table S5. of Whole genome sequencing of the monomorphic pathogen Mycobacterium bovis reveals local differentiation of cattle clinical isolates

Moira Lasserre (4064500)
Pablo Fresia (465613)
Gonzalo Greif (4728270)
Gregorio Iraola (144706)
Miguel Castro-Ramos (4728276)
Arturo Juambeltz (4728267)
Álvaro Nuñez (4728273)
Hugo Naya (144710)
Carlos Robello (238938)
Luisa Berná (4288387)

January 2018

Putative novel genes identified in the Uruguayan strains by assembly of the unmapped reads. (ODS 14 ...

Additional file 1: Figure S1. of Whole genome sequencing of the monomorphic pathogen Mycobacterium bovis reveals local differentiation of cattle clinical isolates

Moira Lasserre (4064500)
Pablo Fresia (465613)
Gonzalo Greif (4728270)
Gregorio Iraola (144706)
Miguel Castro-Ramos (4728276)
Arturo Juambeltz (4728267)
Álvaro Nuñez (4728273)
Hugo Naya (144710)
Carlos Robello (238938)
Luisa Berná (4288387)

January 2018

Sequencing and genome annotation statistics for the 23 Uruguayan strains of M. bovis. (PDF 115 kb

Additional file 13: Table S8. of Whole genome sequencing of the monomorphic pathogen Mycobacterium bovis reveals local differentiation of cattle clinical isolates

Moira Lasserre (4064500)
Pablo Fresia (465613)
Gonzalo Greif (4728270)
Gregorio Iraola (144706)
Miguel Castro-Ramos (4728276)
Arturo Juambeltz (4728267)
Álvaro Nuñez (4728273)
Hugo Naya (144710)
Carlos Robello (238938)
Luisa Berná (4288387)

January 2018

Details on the distinctive characteristics defining each of the three groups described in this study...

Additional file 3: Figure S2. of Whole genome sequencing of the monomorphic pathogen Mycobacterium bovis reveals local differentiation of cattle clinical isolates

Moira Lasserre (4064500)
Pablo Fresia (465613)
Gonzalo Greif (4728270)
Gregorio Iraola (144706)
Miguel Castro-Ramos (4728276)
Arturo Juambeltz (4728267)
Álvaro Nuñez (4728273)
Hugo Naya (144710)
Carlos Robello (238938)
Luisa Berná (4288387)

January 2018

List of tRNAs and corresponding codons in the Uruguayan genomes under study. (PDF 66 kb

Additional file 7: Figure S4a. of Whole genome sequencing of the monomorphic pathogen Mycobacterium bovis reveals local differentiation of cattle clinical isolates

Moira Lasserre (4064500)
Pablo Fresia (465613)
Gonzalo Greif (4728270)
Gregorio Iraola (144706)
Miguel Castro-Ramos (4728276)
Arturo Juambeltz (4728267)
Álvaro Nuñez (4728273)
Hugo Naya (144710)
Carlos Robello (238938)
Luisa Berná (4288387)

January 2018

Validation of in silico RD typing with PCR on 21 of the Uruguayan M. bovis strains. Figure S4b. Alig...

Additional file 12: Figure S5. of Whole genome sequencing of the monomorphic pathogen Mycobacterium bovis reveals local differentiation of cattle clinical isolates

Moira Lasserre (4064500)
Pablo Fresia (465613)
Gonzalo Greif (4728270)
Gregorio Iraola (144706)
Miguel Castro-Ramos (4728276)
Arturo Juambeltz (4728267)
Álvaro Nuñez (4728273)
Hugo Naya (144710)
Carlos Robello (238938)
Luisa Berná (4288387)

January 2018

Bar plots displaying the number of genes affected per strain that are associated to the GO terms car...

Whole genome sequencing of the monomorphic pathogen Mycobacterium bovis reveals local differentiation of cattle clinical isolates

Moira Lasserre
Pablo Fresia
Gonzalo Greif
Gregorio Iraola
Miguel Castro-Ramos
Arturo Juambeltz
Álvaro Nuñez
Hugo Naya
Carlos Robello
Luisa Berná

January 2018

Abstract Background Bovine tuberculosis (bTB) poses serious risks to animal welfare and economy, as ...

Draft genome sequences of two Mycobacterium bovis strains isolated from beef cattle in Paraguay

Sanabria, Lidia
Lagrave, Lorena
Nishibe, Christiane
Ribas, Augusto C.A.
Zumárraga, Martín José
Almeida, Nalvo F.
Araújo, Flábio R.

July 2017

This work reports the draft genome sequences of the Mycobacterium bovis strains M1009 and M1010, iso...

Draft genome sequences of three mycobacterium bovis strains identified in cattle and wildlife in France

Branger, Maxime
Hauer, Amandine
Michelet, Lorraine
Karoui, Claudine
Cochard, Thierry
De Cruz, Krystel
Henault, Sylvie
Boschiroli, María Laura
Biet, Franck

January 2017

Mycobacterium bovis is the etiologic agent of bovine tuberculosis, a chronic infectious disease affe...

Data_Sheet_4_Genomic analysis of Mycobacterium tuberculosis variant bovis strains isolated from bovine in the state of Mato Grosso, Brazil.PDF

Taís Ramalho dos Anjos (14125710)
Vinícius Silva Castro (14125713)
Edson Silva Machado Filho (14125716)
Philip Noel Suffys (10350779)
Harrison Magdinier Gomes (3122343)
Rafael Silva Duarte (10350776)
Eduardo Eustáquio de Souza Figueiredo (3122319)
Ricardo César Tavares Carvalho (3122337)

November 2022

The species Mycobacterium tuberculosis variant bovis (M. tuberculosis var. bovis) is associated with...

Whole Genome Sequence Analysis of <i>Mycobacterium bovis</i> Cattle Isolates, Algeria

Fatah Tazerart
Jamal Saad
Naima Sahraoui
Djamel Yala
Abdellatif Niar
Michel Drancourt

June 2021

Mycobacterium bovis (M. bovis), a Mycobacterium tuberculosis complex species responsible for tubercu...

Table_1_Whole Genome Sequencing of Mycobacterium bovis Isolated From Livestock in the United States, 1989–2018.xlsx

Kathy Orloski (5908496)
Suelee Robbe-Austerman (90829)
Tod Stuber (846459)
Bill Hench (5908499)
Mark Schoenbaum (5908502)

October 2018

The United States official bovine tuberculosis (bTB) eradication program has utilized genotyping for...

Data_Sheet_2_Genomic analysis of Mycobacterium tuberculosis variant bovis strains isolated from bovine in the state of Mato Grosso, Brazil.PDF

Taís Ramalho dos Anjos (14125710)
Vinícius Silva Castro (14125713)
Edson Silva Machado Filho (14125716)
Philip Noel Suffys (10350779)
Harrison Magdinier Gomes (3122343)
Rafael Silva Duarte (10350776)
Eduardo Eustáquio de Souza Figueiredo (3122319)
Ricardo César Tavares Carvalho (3122337)

November 2022

The species Mycobacterium tuberculosis variant bovis (M. tuberculosis var. bovis) is associated with...

Data_Sheet_3_Genomic analysis of Mycobacterium tuberculosis variant bovis strains isolated from bovine in the state of Mato Grosso, Brazil.PDF

Taís Ramalho dos Anjos (14125710)
Vinícius Silva Castro (14125713)
Edson Silva Machado Filho (14125716)
Philip Noel Suffys (10350779)
Harrison Magdinier Gomes (3122343)
Rafael Silva Duarte (10350776)
Eduardo Eustáquio de Souza Figueiredo (3122319)
Ricardo César Tavares Carvalho (3122337)

November 2022

The species Mycobacterium tuberculosis variant bovis (M. tuberculosis var. bovis) is associated with...

Whole Genome Sequence Analysis of Mycobacterium bovis Cattle Isolates, Algeria

Tazerart, Fatah
Saad, Jamal
Sahraoui, Naima
Yala, Djamel
Niar, Abdellatif
Drancourt, Michel

July 2021

International audienceMycobacterium bovis (M. bovis), a Mycobacterium tuberculosis complex species r...

Additional file 9: Table S5. of Whole genome sequencing of the monomorphic pathogen Mycobacterium bovis reveals local differentiation of cattle clinical isolates

Moira Lasserre (4064500)
Pablo Fresia (465613)
Gonzalo Greif (4728270)
Gregorio Iraola (144706)
Miguel Castro-Ramos (4728276)
Arturo Juambeltz (4728267)
Álvaro Nuñez (4728273)
Hugo Naya (144710)
Carlos Robello (238938)
Luisa Berná (4288387)

January 2018

Putative novel genes identified in the Uruguayan strains by assembly of the unmapped reads. (ODS 14 ...

Additional file 1: Figure S1. of Whole genome sequencing of the monomorphic pathogen Mycobacterium bovis reveals local differentiation of cattle clinical isolates

Moira Lasserre (4064500)
Pablo Fresia (465613)
Gonzalo Greif (4728270)
Gregorio Iraola (144706)
Miguel Castro-Ramos (4728276)
Arturo Juambeltz (4728267)
Álvaro Nuñez (4728273)
Hugo Naya (144710)
Carlos Robello (238938)
Luisa Berná (4288387)

January 2018

Sequencing and genome annotation statistics for the 23 Uruguayan strains of M. bovis. (PDF 115 kb

Additional file 13: Table S8. of Whole genome sequencing of the monomorphic pathogen Mycobacterium bovis reveals local differentiation of cattle clinical isolates

Moira Lasserre (4064500)
Pablo Fresia (465613)
Gonzalo Greif (4728270)
Gregorio Iraola (144706)
Miguel Castro-Ramos (4728276)
Arturo Juambeltz (4728267)
Álvaro Nuñez (4728273)
Hugo Naya (144710)
Carlos Robello (238938)
Luisa Berná (4288387)

January 2018

Details on the distinctive characteristics defining each of the three groups described in this study...

Additional file 3: Figure S2. of Whole genome sequencing of the monomorphic pathogen Mycobacterium bovis reveals local differentiation of cattle clinical isolates

Moira Lasserre (4064500)
Pablo Fresia (465613)
Gonzalo Greif (4728270)
Gregorio Iraola (144706)
Miguel Castro-Ramos (4728276)
Arturo Juambeltz (4728267)
Álvaro Nuñez (4728273)
Hugo Naya (144710)
Carlos Robello (238938)
Luisa Berná (4288387)

January 2018

List of tRNAs and corresponding codons in the Uruguayan genomes under study. (PDF 66 kb

Additional file 7: Figure S4a. of Whole genome sequencing of the monomorphic pathogen Mycobacterium bovis reveals local differentiation of cattle clinical isolates

Moira Lasserre (4064500)
Pablo Fresia (465613)
Gonzalo Greif (4728270)
Gregorio Iraola (144706)
Miguel Castro-Ramos (4728276)
Arturo Juambeltz (4728267)
Álvaro Nuñez (4728273)
Hugo Naya (144710)
Carlos Robello (238938)
Luisa Berná (4288387)

January 2018

Validation of in silico RD typing with PCR on 21 of the Uruguayan M. bovis strains. Figure S4b. Alig...

Additional file 12: Figure S5. of Whole genome sequencing of the monomorphic pathogen Mycobacterium bovis reveals local differentiation of cattle clinical isolates

Moira Lasserre (4064500)
Pablo Fresia (465613)
Gonzalo Greif (4728270)
Gregorio Iraola (144706)
Miguel Castro-Ramos (4728276)
Arturo Juambeltz (4728267)
Álvaro Nuñez (4728273)
Hugo Naya (144710)
Carlos Robello (238938)
Luisa Berná (4288387)

January 2018

Bar plots displaying the number of genes affected per strain that are associated to the GO terms car...

Whole genome sequencing of the monomorphic pathogen Mycobacterium bovis reveals local differentiation of cattle clinical isolates

Moira Lasserre
Pablo Fresia
Gonzalo Greif
Gregorio Iraola
Miguel Castro-Ramos
Arturo Juambeltz
Álvaro Nuñez
Hugo Naya
Carlos Robello
Luisa Berná

January 2018

Abstract Background Bovine tuberculosis (bTB) poses serious risks to animal welfare and economy, as ...

Draft genome sequences of two Mycobacterium bovis strains isolated from beef cattle in Paraguay

Sanabria, Lidia
Lagrave, Lorena
Nishibe, Christiane
Ribas, Augusto C.A.
Zumárraga, Martín José
Almeida, Nalvo F.
Araújo, Flábio R.

July 2017

This work reports the draft genome sequences of the Mycobacterium bovis strains M1009 and M1010, iso...

Draft genome sequences of three mycobacterium bovis strains identified in cattle and wildlife in France

Branger, Maxime
Hauer, Amandine
Michelet, Lorraine
Karoui, Claudine
Cochard, Thierry
De Cruz, Krystel
Henault, Sylvie
Boschiroli, María Laura
Biet, Franck

January 2017

Mycobacterium bovis is the etiologic agent of bovine tuberculosis, a chronic infectious disease affe...

Data_Sheet_4_Genomic analysis of Mycobacterium tuberculosis variant bovis strains isolated from bovine in the state of Mato Grosso, Brazil.PDF

Taís Ramalho dos Anjos (14125710)
Vinícius Silva Castro (14125713)
Edson Silva Machado Filho (14125716)
Philip Noel Suffys (10350779)
Harrison Magdinier Gomes (3122343)
Rafael Silva Duarte (10350776)
Eduardo Eustáquio de Souza Figueiredo (3122319)
Ricardo César Tavares Carvalho (3122337)

November 2022

The species Mycobacterium tuberculosis variant bovis (M. tuberculosis var. bovis) is associated with...

Whole Genome Sequence Analysis of <i>Mycobacterium bovis</i> Cattle Isolates, Algeria

Fatah Tazerart
Jamal Saad
Naima Sahraoui
Djamel Yala
Abdellatif Niar
Michel Drancourt

June 2021

Mycobacterium bovis (M. bovis), a Mycobacterium tuberculosis complex species responsible for tubercu...

Table_1_Whole Genome Sequencing of Mycobacterium bovis Isolated From Livestock in the United States, 1989–2018.xlsx

Kathy Orloski (5908496)
Suelee Robbe-Austerman (90829)
Tod Stuber (846459)
Bill Hench (5908499)
Mark Schoenbaum (5908502)

October 2018

The United States official bovine tuberculosis (bTB) eradication program has utilized genotyping for...

Data_Sheet_2_Genomic analysis of Mycobacterium tuberculosis variant bovis strains isolated from bovine in the state of Mato Grosso, Brazil.PDF

Taís Ramalho dos Anjos (14125710)
Vinícius Silva Castro (14125713)
Edson Silva Machado Filho (14125716)
Philip Noel Suffys (10350779)
Harrison Magdinier Gomes (3122343)
Rafael Silva Duarte (10350776)
Eduardo Eustáquio de Souza Figueiredo (3122319)
Ricardo César Tavares Carvalho (3122337)

November 2022

The species Mycobacterium tuberculosis variant bovis (M. tuberculosis var. bovis) is associated with...

Data_Sheet_3_Genomic analysis of Mycobacterium tuberculosis variant bovis strains isolated from bovine in the state of Mato Grosso, Brazil.PDF

Taís Ramalho dos Anjos (14125710)
Vinícius Silva Castro (14125713)
Edson Silva Machado Filho (14125716)
Philip Noel Suffys (10350779)
Harrison Magdinier Gomes (3122343)
Rafael Silva Duarte (10350776)
Eduardo Eustáquio de Souza Figueiredo (3122319)
Ricardo César Tavares Carvalho (3122337)

November 2022

The species Mycobacterium tuberculosis variant bovis (M. tuberculosis var. bovis) is associated with...

Whole Genome Sequence Analysis of Mycobacterium bovis Cattle Isolates, Algeria

Tazerart, Fatah
Saad, Jamal
Sahraoui, Naima
Yala, Djamel
Niar, Abdellatif
Drancourt, Michel

July 2021

International audienceMycobacterium bovis (M. bovis), a Mycobacterium tuberculosis complex species r...

Additional file 8: Table S4. of Whole genome sequencing of the monomorphic pathogen Mycobacterium bovis reveals local differentiation of cattle clinical isolates

Abstract

Extracted data

Additional file 8: Table S4. of Whole genome sequencing of the monomorphic pathogen Mycobacterium bovis reveals local differentiation of cattle clinical isolates

Abstract

Extracted data

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