<p>(a) Hit distribution among the five eukaryotic super-groups defined in Keeling et al. [<a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1005889#pcbi.1005889.ref025" target="_blank">25</a>]. In green, the distribution in UniRef50 (restricted to eukaryotic sequences); in blue the distribution of all BLAST hits; in red the distribution of hits selected by co-occurrence. (b) Distribution of the proportion of Chromalveolate hits in the new families.</p
<p>The assembled contigs were submitted to sequence-similarity search (blastx) against the nonredund...
<p>Amino acid composition of ribosomal proteins obtained using a concatenated set of 48 primary orth...
Investigations into the origin and evolution of regulatory mechanisms require quantitative estimates...
Comparing and aligning protein sequences is an essential task in bioinformatics. More specifically, ...
International audienceComparing and aligning protein sequences is an essential task in bioinformatic...
<p>This figure reports the number of genomes entirely sequenced in each of the 5 supergroups of the ...
<p>Investigations into the origin and evolution of regulatory mechanisms require quantitative estima...
<p>(A) E-value distribution of the top BLAST hits for each unique sequence. (B) Similarity distribut...
<p><b>(A)</b> Score distribution of BLAST hits for each unigene with a cutoff E-value of 1E -5. <b>(...
<p>The matrix shows the 299 largest domain superfamilies that occur in ≥25 proteins in at least one ...
The metabolic and regulatory capabilities of an organism are implicit in its protein content. This i...
<p>Distributions of pairwise global sequence identity for the protein families from <a href="http://...
<p>(A) E-value distribution of top BLAST hits for each unigene (E-value of 1.0E-5). (B) Similarity d...
<p>The 4 differently colored slices correspond to the types of similarities between profiles as desc...
The metabolic and regulatory capabilities of an organism are implicit in its protein content. This i...
<p>The assembled contigs were submitted to sequence-similarity search (blastx) against the nonredund...
<p>Amino acid composition of ribosomal proteins obtained using a concatenated set of 48 primary orth...
Investigations into the origin and evolution of regulatory mechanisms require quantitative estimates...
Comparing and aligning protein sequences is an essential task in bioinformatics. More specifically, ...
International audienceComparing and aligning protein sequences is an essential task in bioinformatic...
<p>This figure reports the number of genomes entirely sequenced in each of the 5 supergroups of the ...
<p>Investigations into the origin and evolution of regulatory mechanisms require quantitative estima...
<p>(A) E-value distribution of the top BLAST hits for each unique sequence. (B) Similarity distribut...
<p><b>(A)</b> Score distribution of BLAST hits for each unigene with a cutoff E-value of 1E -5. <b>(...
<p>The matrix shows the 299 largest domain superfamilies that occur in ≥25 proteins in at least one ...
The metabolic and regulatory capabilities of an organism are implicit in its protein content. This i...
<p>Distributions of pairwise global sequence identity for the protein families from <a href="http://...
<p>(A) E-value distribution of top BLAST hits for each unigene (E-value of 1.0E-5). (B) Similarity d...
<p>The 4 differently colored slices correspond to the types of similarities between profiles as desc...
The metabolic and regulatory capabilities of an organism are implicit in its protein content. This i...
<p>The assembled contigs were submitted to sequence-similarity search (blastx) against the nonredund...
<p>Amino acid composition of ribosomal proteins obtained using a concatenated set of 48 primary orth...
Investigations into the origin and evolution of regulatory mechanisms require quantitative estimates...