Additional file 4: Table S2. of Pleiotropic alterations in gene expression in Latin American Fasciola hepatica isolates with different susceptibility to drugs

Additional file 4: Table S2. of Global expression differences and tissue specific expression differences in rice evolution result in two contrasting types of differentially expressed genes

Youko Horiuchi (3578636)
Yoshiaki Harushima (3578639)
Hironori Fujisawa (20354)
Takako Mochizuki (3370862)
Masahiro Fujita (355423)
Hajime Ohyanagi (14083)
Nori Kurata (233527)

December 2015

Number of highly expressed genes and SNEP detected jiDE genes in each tissue in the two japonica and...

Additional file 1: of Genetic variation associated with increased insecticide resistance in the malaria mosquito, Anopheles coluzzii

Bradley Main (5060450)
Amanda Everitt (5060447)
Anthony Cornel (5060444)
Fereydoun Hormozdiari (32797)
Gregory Lanzaro (642381)

April 2018

Table S1. This table provides links to video examples of the Malpighian tubule dissections described...

Additional file 9: Table S2. of Punctuated chromatin states regulate Plasmodium falciparum antigenic variation at the intron and 2 kb upstream regions

Chengqi Wang (849894)
Swamy Adapa (3495653)
Justin Gibbons (3495656)
Stephen Sutton (46206)
Rays Jiang (3495650)

August 2016

2 kb upstream region FAIRE-Seq signal comparison between var genes and different gene families (P-va...

Additional file 3: Figure S2. of Pleiotropic alterations in gene expression in Latin American Fasciola hepatica isolates with different susceptibility to drugs

Santiago Radio (4796565)
Santiago Fontenla (3622871)
Victoria Solana (4796574)
Anna Matos Salim (4796577)
Flávio Araújo (3799426)
Pedro Ortiz (706932)
Cristian Hoban (4796568)
Estefan Miranda (4796580)
Valeria Gayo (3716926)
Fabiano Pais (4796559)
Hugo Solana (4796571)
Guilherme Oliveira (128322)
Pablo Smircich (158558)
José Tort (4796607)

January 2018

a Correlation of normalized counts and housekeeping genes. Scatterplot showing the correlation of Ce...

Additional file 4: of Genome-wide associations and functional gene analyses for endoparasite resistance in an endangered population of native German Black Pied cattle

Katharina May (4745235)
Carsten Scheper (3576914)
Kerstin BrĂźgemann (6566474)
Tong Yin (3576917)
Christina Strube (82755)
Paula KorkuÄ (6566477)
Gudrun Brockmann (4530142)
Sven KĂśnig (3576923)

April 2019

Table S3. List of all SNP markers associated with the residuals of Fasciola hepatica (rFEC-FH) ident...

Additional File 4:

Rocío Gamez (6701000)
Fernando Rodríguez (295281)
Newton Vidal (6701003)
Sandra Ramirez (6701006)
Roberto Vera Alvarez (6701009)
David Landsman (1763)
Leonardo Mariño-Ramírez (24217)

May 2019

Table S4. Statistics and list of differentially expressed genes shared between B. amyloliquefaciens ...

Additional File 2:

Rocío Gamez (6701000)
Fernando Rodríguez (295281)
Newton Vidal (6701003)
Sandra Ramirez (6701006)
Roberto Vera Alvarez (6701009)
David Landsman (1763)
Leonardo Mariño-Ramírez (24217)

May 2019

Table S2. Statistics and list of differentially expressed genes in samples inoculated with B. amylol...

Additional file 1: Table S1. of Transcriptome profiling of gene expression during immunisation trial against Fasciola hepatica: identification of genes and pathways involved in conferring immunoprotection in a murine model

Jose Rojas-Caraballo (615663)
Julio López-Abán (134057)
Darwin Moreno-Pérez (3690172)
Belén Vicente (615664)
Pedro Fernández-Soto (403075)
Esther del Olmo (615665)
Manuel Patarroyo (290368)
Antonio Muro (134062)

January 2017

a The amino acid sequences for each peptide selected for the in vivo protection studies. The GenBank...

Additional file 6: of Schizont transcriptome variation among clinical isolates and laboratory-adapted clones of the malaria parasite Plasmodium falciparum

Sarah Tarr (6067133)
Ofelia DĂaz-Ingelmo (6067136)
Lindsay Stewart (560932)
Suzanne Hocking (6067139)
Lee Murray (3357719)
Craig Duffy (3550022)
Thomas Otto (5241)
Lia Chappell (530631)
Julian Rayner (3988232)
Gordon Awandare (3690160)
David Conway (218340)

December 2018

Table S3. Log2 fold differences in transcript levels of genes differentially expressed among pairwis...

Additional file 4: of Schizont transcriptome variation among clinical isolates and laboratory-adapted clones of the malaria parasite Plasmodium falciparum

Sarah Tarr (6067133)
Ofelia DĂaz-Ingelmo (6067136)
Lindsay Stewart (560932)
Suzanne Hocking (6067139)
Lee Murray (3357719)
Craig Duffy (3550022)
Thomas Otto (5241)
Lia Chappell (530631)
Julian Rayner (3988232)
Gordon Awandare (3690160)
David Conway (218340)

December 2018

Table S2. Genes showing significant differences in transcript levels (log2 fold >â2, at least 4 fo...

Additional file 2: of Genetic ancestry, admixture and health determinants in Latin America

Emily Norris (4720908)
Lu Wang (45927)
Andrew Conley (3351989)
Lavanya Rishishwar (146573)
Leonardo MariĂąo-RamĂrez (3523928)
Augusto Valderrama-Aguirre (6075608)
I. Jordan (3455471)

December 2018

Table S2. Lists of pathways that show significant enrichment of genes with mapped ancestry-enriched ...

Additional file 4: of Patterns of Fasciola hepatica infection in Danish dairy cattle: implications for on-farm control of the parasite based on different diagnostic methods

Nao Takeuchi-Storm (4583884)
Matthew Denwood (3098316)
Heidi Petersen (6164495)
Heidi Enemark (3536069)
Anna-Sofie Stensgaard (337609)
Mita Sengupta (6164498)
Nicola Beesley (6164501)
Jane Hodgkinson (6164504)
Diana Williams (2016130)
Stig Thamsborg (211405)

December 2018

Table S1. Summary of snails collected in 2017 that were analysed by PCR for snail species and F. hep...

Additional file 4: Table S4. of Gene expression changes in the salivary glands of Anopheles coluzzii elicited by Plasmodium berghei infection

Renato Pinheiro-Silva (3513131)
Lara Borges (148480)
Luís Coelho (64959)
Alejandro Cabezas-Cruz (420438)
James Valdés (3513134)
Virgílio do Rosário (149514)
José de la Fuente (35632)
Ana Domingos (310023)

September 2015

List of genes expressed in the female salivary glands of An. coluzzii of the group infected with P. ...

Additional File 3:

Rocío Gamez (6701000)
Fernando Rodríguez (295281)
Newton Vidal (6701003)
Sandra Ramirez (6701006)
Roberto Vera Alvarez (6701009)
David Landsman (1763)
Leonardo Mariño-Ramírez (24217)

May 2019

Table S3. Statistics and list of differentially expressed genes in samples inoculated with P. fluore...

Additional file 1: Table S1. of Oral immune priming with Bacillus thuringiensis induces a shift in the gene expression of Tribolium castaneum larvae

Greenwood, Jenny
Milutinovic, Barbara
Peuß, Robert
Behrens, Sarah
Essar, Daniela
Rosenstiel, Philip
Schulenburg, Hinrich
Kurtz, Joachim

January 2017

Lists of all differentially expressed genes in the different priming-challenge treatments (compared ...

Additional file 4: Table S2. of Global expression differences and tissue specific expression differences in rice evolution result in two contrasting types of differentially expressed genes

Youko Horiuchi (3578636)
Yoshiaki Harushima (3578639)
Hironori Fujisawa (20354)
Takako Mochizuki (3370862)
Masahiro Fujita (355423)
Hajime Ohyanagi (14083)
Nori Kurata (233527)

December 2015

Number of highly expressed genes and SNEP detected jiDE genes in each tissue in the two japonica and...

Additional file 1: of Genetic variation associated with increased insecticide resistance in the malaria mosquito, Anopheles coluzzii

Bradley Main (5060450)
Amanda Everitt (5060447)
Anthony Cornel (5060444)
Fereydoun Hormozdiari (32797)
Gregory Lanzaro (642381)

April 2018

Table S1. This table provides links to video examples of the Malpighian tubule dissections described...

Additional file 9: Table S2. of Punctuated chromatin states regulate Plasmodium falciparum antigenic variation at the intron and 2 kb upstream regions

Chengqi Wang (849894)
Swamy Adapa (3495653)
Justin Gibbons (3495656)
Stephen Sutton (46206)
Rays Jiang (3495650)

August 2016

2 kb upstream region FAIRE-Seq signal comparison between var genes and different gene families (P-va...

Additional file 3: Figure S2. of Pleiotropic alterations in gene expression in Latin American Fasciola hepatica isolates with different susceptibility to drugs

Santiago Radio (4796565)
Santiago Fontenla (3622871)
Victoria Solana (4796574)
Anna Matos Salim (4796577)
Flávio Araújo (3799426)
Pedro Ortiz (706932)
Cristian Hoban (4796568)
Estefan Miranda (4796580)
Valeria Gayo (3716926)
Fabiano Pais (4796559)
Hugo Solana (4796571)
Guilherme Oliveira (128322)
Pablo Smircich (158558)
José Tort (4796607)

January 2018

a Correlation of normalized counts and housekeeping genes. Scatterplot showing the correlation of Ce...

Additional file 4: of Genome-wide associations and functional gene analyses for endoparasite resistance in an endangered population of native German Black Pied cattle

Katharina May (4745235)
Carsten Scheper (3576914)
Kerstin BrĂźgemann (6566474)
Tong Yin (3576917)
Christina Strube (82755)
Paula KorkuÄ (6566477)
Gudrun Brockmann (4530142)
Sven KĂśnig (3576923)

April 2019

Table S3. List of all SNP markers associated with the residuals of Fasciola hepatica (rFEC-FH) ident...

Additional File 4:

Rocío Gamez (6701000)
Fernando Rodríguez (295281)
Newton Vidal (6701003)
Sandra Ramirez (6701006)
Roberto Vera Alvarez (6701009)
David Landsman (1763)
Leonardo Mariño-Ramírez (24217)

May 2019

Table S4. Statistics and list of differentially expressed genes shared between B. amyloliquefaciens ...

Additional File 2:

Rocío Gamez (6701000)
Fernando Rodríguez (295281)
Newton Vidal (6701003)
Sandra Ramirez (6701006)
Roberto Vera Alvarez (6701009)
David Landsman (1763)
Leonardo Mariño-Ramírez (24217)

May 2019

Table S2. Statistics and list of differentially expressed genes in samples inoculated with B. amylol...

Additional file 1: Table S1. of Transcriptome profiling of gene expression during immunisation trial against Fasciola hepatica: identification of genes and pathways involved in conferring immunoprotection in a murine model

Jose Rojas-Caraballo (615663)
Julio López-Abán (134057)
Darwin Moreno-Pérez (3690172)
Belén Vicente (615664)
Pedro Fernández-Soto (403075)
Esther del Olmo (615665)
Manuel Patarroyo (290368)
Antonio Muro (134062)

January 2017

a The amino acid sequences for each peptide selected for the in vivo protection studies. The GenBank...

Additional file 6: of Schizont transcriptome variation among clinical isolates and laboratory-adapted clones of the malaria parasite Plasmodium falciparum

Sarah Tarr (6067133)
Ofelia DĂaz-Ingelmo (6067136)
Lindsay Stewart (560932)
Suzanne Hocking (6067139)
Lee Murray (3357719)
Craig Duffy (3550022)
Thomas Otto (5241)
Lia Chappell (530631)
Julian Rayner (3988232)
Gordon Awandare (3690160)
David Conway (218340)

December 2018

Table S3. Log2 fold differences in transcript levels of genes differentially expressed among pairwis...

Additional file 4: of Schizont transcriptome variation among clinical isolates and laboratory-adapted clones of the malaria parasite Plasmodium falciparum

Sarah Tarr (6067133)
Ofelia DĂaz-Ingelmo (6067136)
Lindsay Stewart (560932)
Suzanne Hocking (6067139)
Lee Murray (3357719)
Craig Duffy (3550022)
Thomas Otto (5241)
Lia Chappell (530631)
Julian Rayner (3988232)
Gordon Awandare (3690160)
David Conway (218340)

December 2018

Table S2. Genes showing significant differences in transcript levels (log2 fold >â2, at least 4 fo...

Additional file 2: of Genetic ancestry, admixture and health determinants in Latin America

Emily Norris (4720908)
Lu Wang (45927)
Andrew Conley (3351989)
Lavanya Rishishwar (146573)
Leonardo MariĂąo-RamĂrez (3523928)
Augusto Valderrama-Aguirre (6075608)
I. Jordan (3455471)

December 2018

Table S2. Lists of pathways that show significant enrichment of genes with mapped ancestry-enriched ...

Additional file 4: of Patterns of Fasciola hepatica infection in Danish dairy cattle: implications for on-farm control of the parasite based on different diagnostic methods

Nao Takeuchi-Storm (4583884)
Matthew Denwood (3098316)
Heidi Petersen (6164495)
Heidi Enemark (3536069)
Anna-Sofie Stensgaard (337609)
Mita Sengupta (6164498)
Nicola Beesley (6164501)
Jane Hodgkinson (6164504)
Diana Williams (2016130)
Stig Thamsborg (211405)

December 2018

Table S1. Summary of snails collected in 2017 that were analysed by PCR for snail species and F. hep...

Additional file 4: Table S4. of Gene expression changes in the salivary glands of Anopheles coluzzii elicited by Plasmodium berghei infection

Renato Pinheiro-Silva (3513131)
Lara Borges (148480)
Luís Coelho (64959)
Alejandro Cabezas-Cruz (420438)
James Valdés (3513134)
Virgílio do Rosário (149514)
José de la Fuente (35632)
Ana Domingos (310023)

September 2015

List of genes expressed in the female salivary glands of An. coluzzii of the group infected with P. ...

Additional File 3:

Rocío Gamez (6701000)
Fernando Rodríguez (295281)
Newton Vidal (6701003)
Sandra Ramirez (6701006)
Roberto Vera Alvarez (6701009)
David Landsman (1763)
Leonardo Mariño-Ramírez (24217)

May 2019

Table S3. Statistics and list of differentially expressed genes in samples inoculated with P. fluore...

Additional file 1: Table S1. of Oral immune priming with Bacillus thuringiensis induces a shift in the gene expression of Tribolium castaneum larvae

Greenwood, Jenny
Milutinovic, Barbara
Peuß, Robert
Behrens, Sarah
Essar, Daniela
Rosenstiel, Philip
Schulenburg, Hinrich
Kurtz, Joachim

January 2017

Lists of all differentially expressed genes in the different priming-challenge treatments (compared ...

Additional file 4: Table S2. of Global expression differences and tissue specific expression differences in rice evolution result in two contrasting types of differentially expressed genes

Youko Horiuchi (3578636)
Yoshiaki Harushima (3578639)
Hironori Fujisawa (20354)
Takako Mochizuki (3370862)
Masahiro Fujita (355423)
Hajime Ohyanagi (14083)
Nori Kurata (233527)

December 2015

Number of highly expressed genes and SNEP detected jiDE genes in each tissue in the two japonica and...

Additional file 1: of Genetic variation associated with increased insecticide resistance in the malaria mosquito, Anopheles coluzzii

Bradley Main (5060450)
Amanda Everitt (5060447)
Anthony Cornel (5060444)
Fereydoun Hormozdiari (32797)
Gregory Lanzaro (642381)

April 2018

Table S1. This table provides links to video examples of the Malpighian tubule dissections described...

Additional file 9: Table S2. of Punctuated chromatin states regulate Plasmodium falciparum antigenic variation at the intron and 2 kb upstream regions

Chengqi Wang (849894)
Swamy Adapa (3495653)
Justin Gibbons (3495656)
Stephen Sutton (46206)
Rays Jiang (3495650)

August 2016

2 kb upstream region FAIRE-Seq signal comparison between var genes and different gene families (P-va...

Additional file 4: Table S2. of Pleiotropic alterations in gene expression in Latin American Fasciola hepatica isolates with different susceptibility to drugs

Abstract

Extracted data

Additional file 4: Table S2. of Pleiotropic alterations in gene expression in Latin American Fasciola hepatica isolates with different susceptibility to drugs

Abstract

Extracted data

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