<p>The meaning of the node and edge colors is the same as in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0190812#pone.0190812.g006" target="_blank">Fig 6</a>. A) Complete network with a subset of 19 top scored indirect interactions is shown for <i>G</i><sub>qr</sub> > 0.05. B) Network of E2F1 direct and indirect (<i>G</i><sub>qr</sub> > 0.01) regulators of E2F1, showing multiple indirect feedback loops in the regulation of E2F1 itself.</p
<p>(A) Gene network composed of the transcription regulators <i>RTG1/3</i>, <i>HMS1</i>, <i>ZCF21</i...
<p>The left panel shows a schematic diagram of the network topology, reproduced from Dunn <i>et al.<...
<p>A MAPK1,2 and AKT network downstream from EGFR, which we assembled from various sources, and used...
<p>The network of micFFLs involving E2F1 as transcription factor and RB1 as target.</p
<p>(A) Transcriptional regulatory network of GDNF-dependent endocrine resistance highlighting the bi...
<p><b>A.</b> PPI sub-network of shortest paths connecting the 38 transcription factors controlled by...
Motivation: Uncovering mechanisms underlying gene expression control is crucial to understand comple...
<div><p>(Left) Feed-forward loop: TF X regulates TF Y, and both X and Y jointly regulate gene Z.</p>...
<p>ERK1/2 and Akt (green nodes) have been shown to directly modulate the activity and/or expression ...
<p><b>A</b>) Graphical representation of the FNR transcriptional network. FNR is shown in the blue o...
Various studies have detailed the role of E2F proteins in both transcription activation and repressi...
<p>The transcription regulation networks initiated through activation of SP1 (A), c-Myc (B), HNF4-al...
<div><p>(A) A transcriptional regulation network. Solid black bars indicate genes that encode transc...
A wealth of physical interaction data between transcription factors (TFs) and DNA has been generated...
<p>The network includes all the gene regulatory relationships between and within top 10 gene regulat...
<p>(A) Gene network composed of the transcription regulators <i>RTG1/3</i>, <i>HMS1</i>, <i>ZCF21</i...
<p>The left panel shows a schematic diagram of the network topology, reproduced from Dunn <i>et al.<...
<p>A MAPK1,2 and AKT network downstream from EGFR, which we assembled from various sources, and used...
<p>The network of micFFLs involving E2F1 as transcription factor and RB1 as target.</p
<p>(A) Transcriptional regulatory network of GDNF-dependent endocrine resistance highlighting the bi...
<p><b>A.</b> PPI sub-network of shortest paths connecting the 38 transcription factors controlled by...
Motivation: Uncovering mechanisms underlying gene expression control is crucial to understand comple...
<div><p>(Left) Feed-forward loop: TF X regulates TF Y, and both X and Y jointly regulate gene Z.</p>...
<p>ERK1/2 and Akt (green nodes) have been shown to directly modulate the activity and/or expression ...
<p><b>A</b>) Graphical representation of the FNR transcriptional network. FNR is shown in the blue o...
Various studies have detailed the role of E2F proteins in both transcription activation and repressi...
<p>The transcription regulation networks initiated through activation of SP1 (A), c-Myc (B), HNF4-al...
<div><p>(A) A transcriptional regulation network. Solid black bars indicate genes that encode transc...
A wealth of physical interaction data between transcription factors (TFs) and DNA has been generated...
<p>The network includes all the gene regulatory relationships between and within top 10 gene regulat...
<p>(A) Gene network composed of the transcription regulators <i>RTG1/3</i>, <i>HMS1</i>, <i>ZCF21</i...
<p>The left panel shows a schematic diagram of the network topology, reproduced from Dunn <i>et al.<...
<p>A MAPK1,2 and AKT network downstream from EGFR, which we assembled from various sources, and used...