The coalescent with recombination is a fundamental model to describe the genealogical history of DNA sequence samples from recombining organisms. Considering recombination as a process which acts along genomes and which creates sequence segments with shared ancestry, we study the influence of single recombination events upon tree characteristics of the coalescent. We focus on properties such as tree height and tree balance and quantify analytically the changes in these quantities incurred by recombination in terms of probability distributions. We find that changes in tree topology are often relatively mild under conditions of neutral evolution, while changes in tree height are on average quite large. Our results add to a quantitative unders...
The recent explosion of genomic data has underscored the need for interpretable and comprehensive an...
Coalescent theory provides an elegant and powerful method for understanding the shape of gene geneal...
<p>Many studies have been conducted in the last two decades to search for traces of recent positive ...
The coalescent with recombination is a fundamental model to describe the genealogical history of DNA...
<p><b>A</b>: Sketch of a neutral coalescent tree with tree size . <b>B</b> and <b>C</b>: A selective...
We investigate the shape of a phylogenetic tree reconstructed from sequences evolving under the coal...
Coalescent theory deals with the dynamics of how sampled genetic material has spread through a popul...
Recombination is a powerful evolutionary process that shapes the genetic diversity observed in the p...
The coalescent with recombination describes the distribution of genealogical histories and resulting...
As the field of phylogenetics transitions into phylogenomics it has spurred a shift in the general p...
<p>A: Tree of size generated under the coalescent process. The -axis represents a time scale, with ...
Phylogenomic analyses under the multispecies coalescent model assume no recombination within locus a...
International audienceThe genealogy at a single locus of a constant size N population in equilibrium...
Mathematically, Coalescent Theory describes genealogies within a population in the form of (binary)...
<p>One simulation run using <i>ms </i><a href="http://www.plosone.org/article/info:doi/10.1371/journ...
The recent explosion of genomic data has underscored the need for interpretable and comprehensive an...
Coalescent theory provides an elegant and powerful method for understanding the shape of gene geneal...
<p>Many studies have been conducted in the last two decades to search for traces of recent positive ...
The coalescent with recombination is a fundamental model to describe the genealogical history of DNA...
<p><b>A</b>: Sketch of a neutral coalescent tree with tree size . <b>B</b> and <b>C</b>: A selective...
We investigate the shape of a phylogenetic tree reconstructed from sequences evolving under the coal...
Coalescent theory deals with the dynamics of how sampled genetic material has spread through a popul...
Recombination is a powerful evolutionary process that shapes the genetic diversity observed in the p...
The coalescent with recombination describes the distribution of genealogical histories and resulting...
As the field of phylogenetics transitions into phylogenomics it has spurred a shift in the general p...
<p>A: Tree of size generated under the coalescent process. The -axis represents a time scale, with ...
Phylogenomic analyses under the multispecies coalescent model assume no recombination within locus a...
International audienceThe genealogy at a single locus of a constant size N population in equilibrium...
Mathematically, Coalescent Theory describes genealogies within a population in the form of (binary)...
<p>One simulation run using <i>ms </i><a href="http://www.plosone.org/article/info:doi/10.1371/journ...
The recent explosion of genomic data has underscored the need for interpretable and comprehensive an...
Coalescent theory provides an elegant and powerful method for understanding the shape of gene geneal...
<p>Many studies have been conducted in the last two decades to search for traces of recent positive ...