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The freshwater crustacean Daphnia is an emerging model system in the biology of aging. Diversity in aging patterns is thought to be caused by ecological variation in selection on age-specific performance. Previous work in Daphnia has shown a strong correspondence between selective differences and genetic variation in aging in the Daphnia pulex species complex. However, recent evidence suggests obligate asexuality could account for the more rapid aging found in pond genotypes com-pared with lake genotypes without invoking differences in selection. Evolutionary biologists have to date assumed equivalent operation of neutral processes when comparing aging across populations, but a shift in the breeding system changes the basic dynamics of neutral evolution. To test the hypothesis that the breeding system could explain the short lifespans of pond-dwelling Daphnia, we compared aging of sexual and asexual Daphnia clones from temporary ponds. Our data contradict the breeding system hypothesis. Differences in aging between the breed-ing systems were slight, and trended in the opposite direction from that predicted: asexual clones had longer lifespans and appeared to age more slowly than sexual clones. We conclude that divergent selection between habitats remains the best explanation for differences in aging between Daphnia species