Summary: We have developed ClueGO, an easy to use Cytoscape plug-in that strongly improves biological interpretation of large lists of genes. ClueGO integrates Gene Ontology (GO) terms as well as KEGG/BioCarta pathways and creates a functionally organized GO/pathway term network. It can analyze one or compare two lists of genes and comprehensively visualizes functionally grouped terms. A one-click update option allows ClueGO to automatically download the most recent GO/KEGG release at any time. ClueGO provides an intuitive representation of the analysis results and can be optionally used in conjunction with the GOlorize plug-in
Motivation: The Gene Ontology (GO) is a widely used terminology for gene product characterisation in...
Motivation: High-throughput technologies such as DNA sequencing and microarrays have created the nee...
The Gene Ontology (GO; http://www.geneontology.org) is a community-based bioinformatics resource tha...
Summary: We have developed ClueGO, an easy to use Cytoscape plug-in that strongly improves biologica...
International audienceThe interpretation of high dimensional datasets resulting from genomic and pro...
International audienceLarge scale technologies produce massive amounts of experimental data that nee...
The Cytoscape ClueGO plug-in permitted us to cluster selected candidate genes into common pathways, ...
Summary: The Biological Networks Gene Ontology tool (BiNGO) is an open-source Java tool to determine...
Gene ontology and pathway enrichment analysis were conducted using the ClueGO plugin in Cytoscape. A...
Summary: The CluePedia Cytoscape plugin is a search tool for new markers potentially associated to p...
Summary: BiNGO is an open-source Java tool to determine which Gene Ontology (GO) terms are significa...
<p><b>A.</b> Functionally grouped network of enriched categories was generated for the hub genes and...
The pie charts present functional groups for analyzed genes, based on GO, KEGG, Reactome and WikiPat...
The Biological Networks Gene Ontology tool (BiNGO) is an open-source Java tool to determine which Ge...
The Gene Ontology (GO; http://www.geneontology.org) is a community-based bioinformatics resource tha...
Motivation: The Gene Ontology (GO) is a widely used terminology for gene product characterisation in...
Motivation: High-throughput technologies such as DNA sequencing and microarrays have created the nee...
The Gene Ontology (GO; http://www.geneontology.org) is a community-based bioinformatics resource tha...
Summary: We have developed ClueGO, an easy to use Cytoscape plug-in that strongly improves biologica...
International audienceThe interpretation of high dimensional datasets resulting from genomic and pro...
International audienceLarge scale technologies produce massive amounts of experimental data that nee...
The Cytoscape ClueGO plug-in permitted us to cluster selected candidate genes into common pathways, ...
Summary: The Biological Networks Gene Ontology tool (BiNGO) is an open-source Java tool to determine...
Gene ontology and pathway enrichment analysis were conducted using the ClueGO plugin in Cytoscape. A...
Summary: The CluePedia Cytoscape plugin is a search tool for new markers potentially associated to p...
Summary: BiNGO is an open-source Java tool to determine which Gene Ontology (GO) terms are significa...
<p><b>A.</b> Functionally grouped network of enriched categories was generated for the hub genes and...
The pie charts present functional groups for analyzed genes, based on GO, KEGG, Reactome and WikiPat...
The Biological Networks Gene Ontology tool (BiNGO) is an open-source Java tool to determine which Ge...
The Gene Ontology (GO; http://www.geneontology.org) is a community-based bioinformatics resource tha...
Motivation: The Gene Ontology (GO) is a widely used terminology for gene product characterisation in...
Motivation: High-throughput technologies such as DNA sequencing and microarrays have created the nee...
The Gene Ontology (GO; http://www.geneontology.org) is a community-based bioinformatics resource tha...