Motivation: The number of completely sequenced genomes is continuously rising, allowing for comparative analyses of genomic variation. Such analyses are often based on whole-genome alignments to elucidate structural differences arising from insertions, deletions or from rearrangement events. Computational tools that can visualize genome alignments in a meaningful manner are needed to help researchers gain new insights into the underlying data. Such visualizations typically are either realized in a linear fashion as in genome browsers or by using a circular approach, where relationships between genomic regions are indicated by arcs. Both methods allow for the integration of additional information such as experimental data or annotations. How...
In the fourteen years since the announcement of the rough draft of the human genome there has been a...
Due to ongoing advances in sequencing tech-nologies, billions of nucleotide sequences are now produc...
+ These authors contributed equally to this work. Motivation: Researchers now have access to large v...
One of the main tasks in current genomics is comparing complete genomes of different organisms. For ...
To the Editor Visualization has played an extremely important role in the current genomic revolution...
ABSTRACT Whole genome alignments and comparative analysis are key methods in the quest of unraveling...
Motivation: Researchers now have access to large volumes of genome sequences for comparative analysi...
We introduce a pipeline to easily generate collections of web accessible UCSC genome browsers inter-...
The amount of information about genomes, both in the form of complete sequences and annotations, has...
In this article we describe and demonstrate the versatility of a computer program, GENOME MAPPING, t...
Background Recent advances in rapid, low-cost sequencing have opened up the opportunity to study ...
The availability of the assembled mouse genome makes possible, for the first time, an alignment and...
Background: The increasing application of next generation sequencing technologies has led to the ...
The increase in the volume of genomic data due to the decrease in the cost of whole genome sequencin...
ABSTRACT: Genome resequencing with short reads generally relies on alignments against a single refer...
In the fourteen years since the announcement of the rough draft of the human genome there has been a...
Due to ongoing advances in sequencing tech-nologies, billions of nucleotide sequences are now produc...
+ These authors contributed equally to this work. Motivation: Researchers now have access to large v...
One of the main tasks in current genomics is comparing complete genomes of different organisms. For ...
To the Editor Visualization has played an extremely important role in the current genomic revolution...
ABSTRACT Whole genome alignments and comparative analysis are key methods in the quest of unraveling...
Motivation: Researchers now have access to large volumes of genome sequences for comparative analysi...
We introduce a pipeline to easily generate collections of web accessible UCSC genome browsers inter-...
The amount of information about genomes, both in the form of complete sequences and annotations, has...
In this article we describe and demonstrate the versatility of a computer program, GENOME MAPPING, t...
Background Recent advances in rapid, low-cost sequencing have opened up the opportunity to study ...
The availability of the assembled mouse genome makes possible, for the first time, an alignment and...
Background: The increasing application of next generation sequencing technologies has led to the ...
The increase in the volume of genomic data due to the decrease in the cost of whole genome sequencin...
ABSTRACT: Genome resequencing with short reads generally relies on alignments against a single refer...
In the fourteen years since the announcement of the rough draft of the human genome there has been a...
Due to ongoing advances in sequencing tech-nologies, billions of nucleotide sequences are now produc...
+ These authors contributed equally to this work. Motivation: Researchers now have access to large v...