Add to ORKGMotivation: Efficient and fast next-generation sequencing (NGS) algo-rithms are essential to analyze the terabytes of data generated by the NGS machines. A serious bottleneck can be the design of such algo-rithms, as they require sophisticated data structures and advanced hardware implementation. Results: We propose an open-source library dedicated to genome assembly and analysis to fasten the process of developing efficient software. The library is based on a recent optimized de-Bruijn graph implementation allowing complex genomes to be processed on desk-top computers using fast algorithms with low memory footprints. Availability and implementation: The GATB library is written in C++ and is available at the following Web sit
Several sequencing technologies have been introduced in recent years that dramatically outperform th...
A revolution in personalized genomics will occur when scientists can sequence genomes of millions of...
Background: In recent years more than 20 assemblers have been proposed to tackle the hard task of as...
Motivation: Efficient and fast NGS algorithms are essential to ana-lyze the terabytes of data genera...
International audienceMotivation: Efficient and fast NGS algorithms are essential to ana-lyze the te...
International audienceThe analysis of NGS data remains a time and space-consuming task. Many efforts...
International audienceThe analysis of NGS data remains a time and space-consuming task. Many efforts...
International audienceThe analysis of NGS data remains a time and space-consuming task. Many efforts...
The recent advent of massively parallel sequencing technologies has drastically reduced the cost of ...
De novo genome assembly is the process of reconstructing a complete genomic sequence from countless ...
We now need more than ever to make genome analysis more intelligent. We need to read, analyze, and i...
Background: The analysis of next-generation sequencing data from large genomes is a timely research ...
Next-generation sequencing (NGS) platforms have presented unique challenges to the computing communi...
De novo genome assembly is the process of reconstructing a complete genomic sequence from countless ...
Several sequencing technologies have been introduced in recent years that dramatically outperform th...
A revolution in personalized genomics will occur when scientists can sequence genomes of millions of...
Background: In recent years more than 20 assemblers have been proposed to tackle the hard task of as...
Motivation: Efficient and fast NGS algorithms are essential to ana-lyze the terabytes of data genera...
International audienceMotivation: Efficient and fast NGS algorithms are essential to ana-lyze the te...
International audienceThe analysis of NGS data remains a time and space-consuming task. Many efforts...
International audienceThe analysis of NGS data remains a time and space-consuming task. Many efforts...
International audienceThe analysis of NGS data remains a time and space-consuming task. Many efforts...
The recent advent of massively parallel sequencing technologies has drastically reduced the cost of ...
De novo genome assembly is the process of reconstructing a complete genomic sequence from countless ...
We now need more than ever to make genome analysis more intelligent. We need to read, analyze, and i...
Background: The analysis of next-generation sequencing data from large genomes is a timely research ...
Next-generation sequencing (NGS) platforms have presented unique challenges to the computing communi...
De novo genome assembly is the process of reconstructing a complete genomic sequence from countless ...
Several sequencing technologies have been introduced in recent years that dramatically outperform th...
A revolution in personalized genomics will occur when scientists can sequence genomes of millions of...
Background: In recent years more than 20 assemblers have been proposed to tackle the hard task of as...