Add to ORKGCross-species sequence comparison is a powerful approach to analyze functional sites in genomic sequences and many discoveries have been made based on genomic alignments. Herein, we present a WWW-based software system for multiple alignment of large genomic sequences. Our server utilizes the previously developed combination of CHAOS and DIALIGN to achieve both speed and alignment accu-racy. CHAOS is a fast database search tool that cre-ates a list of local sequence similarities. These are used by DIALIGN as anchor points to speed up the final alignment procedure. The resulting alignment is returned to the user in different formats together with a list of anchor points found by CHAOS. The CHAOS/ DIALIGN software is freely available a
Abstract Background Phylogeny-aware progressive alignment has been found to perform well in phylogen...
Automatic gene prediction is one of the major challenges in computational sequence analysis. Traditi...
Abstract Background With advances in DNA re-sequencing methods and Next-Generation parallel sequenci...
Cross-species sequence comparison is a powerful approach to analyze functional sites in genomic sequ...
BACKGROUND: Genomic sequence alignment is a powerful method for genome analysis and annotation, as a...
Abstract Background Genomic sequence alignment is a powerful method for genome analysis and annotati...
Motivation: DIALIGN is a new method for pairwise as well as multiple alignment of nucleic acid and p...
Morgenstern B, Frech K, Dress A, Werner T. DIALIGN: finding local similarities by multiple sequence ...
Background: Automated software tools for multiple alignment often fail to produce biologically meani...
This paper presents Tcoffee@igs, a new server provided to the community by Hewlet Packard computers ...
Summary: We present a www server for homology-based gene prediction. The user enters a pair of evolu...
[[abstract]]This thesis is to design the software, which can align the sequence of Express Sequence ...
Abstract Background DIALIGN-T is a reimplementation of the multiple-alignment program DIALIGN. Due t...
This paper presents Tcoffee@igs, a new server provided to the community by Hewlet Packard computers ...
Taher L, Rinner O, Garg S, Sczyrba A, Morgenstern B. AGenDA: gene prediction by cross-species sequen...
Abstract Background Phylogeny-aware progressive alignment has been found to perform well in phylogen...
Automatic gene prediction is one of the major challenges in computational sequence analysis. Traditi...
Abstract Background With advances in DNA re-sequencing methods and Next-Generation parallel sequenci...
Cross-species sequence comparison is a powerful approach to analyze functional sites in genomic sequ...
BACKGROUND: Genomic sequence alignment is a powerful method for genome analysis and annotation, as a...
Abstract Background Genomic sequence alignment is a powerful method for genome analysis and annotati...
Motivation: DIALIGN is a new method for pairwise as well as multiple alignment of nucleic acid and p...
Morgenstern B, Frech K, Dress A, Werner T. DIALIGN: finding local similarities by multiple sequence ...
Background: Automated software tools for multiple alignment often fail to produce biologically meani...
This paper presents Tcoffee@igs, a new server provided to the community by Hewlet Packard computers ...
Summary: We present a www server for homology-based gene prediction. The user enters a pair of evolu...
[[abstract]]This thesis is to design the software, which can align the sequence of Express Sequence ...
Abstract Background DIALIGN-T is a reimplementation of the multiple-alignment program DIALIGN. Due t...
This paper presents Tcoffee@igs, a new server provided to the community by Hewlet Packard computers ...
Taher L, Rinner O, Garg S, Sczyrba A, Morgenstern B. AGenDA: gene prediction by cross-species sequen...
Abstract Background Phylogeny-aware progressive alignment has been found to perform well in phylogen...
Automatic gene prediction is one of the major challenges in computational sequence analysis. Traditi...
Abstract Background With advances in DNA re-sequencing methods and Next-Generation parallel sequenci...