Abstract. The vertical distribution of the cyanobacterium Planktothrix (Oscillatoria) rubescens in Lake Zurich was investigated from March 1993 to June 1995 by collecting filaments on filters and measuring them by epifluorescence microscopy and computer image analysis. The initial population, which began to stratify in April, decreased by up to 99 % by June. During the summer, the population peaked at depths of 8—15 m; it reached a maximum areal filament-volume concentration of-60 cm3 m~ 2 of lake surface in early September and was then entrained in the deepening surface layer. It became mixed progressively deeper, to the lake bottom in the cold winter of 1993-94, but less completely in the milder winter of 1994-95. Most of the filaments re...