Add to ORKGNucleotides surrounding a codon influence the choice of this particular codon from among the group of possible synonymous codons. The strongest influence on codon usage arises from the nucleotide immediately following the codon and is known as the N1 context. We studied the relative abundance of codons with N1 contexts in genes from four eukaryotes for which the entire genomes have been sequenced: Homo sapiens, Drosophila melanogaster, Caenorhab-ditis elegans and Arabidopsis thaliana. For all the studied organisms it was found that 90 % of the codons have a statistically significant N1 context-dependent codon bias. The relative abundance of each codon with an N1 context was compared with the relative abundance of the same 4mer oligonucleoti...
Codon usage bias, where certain codons are used more frequently than their synonymous counterparts, ...
Codon bias in the genome of an organism influences its phenome by changing the speed and efficiency ...
Codon usage and codon-pair context are important gene primary structure features that influence mRNA...
The relationship of nucleotide context on fifteen evolutionarily distinct bacterial species was inve...
Codon pair usage (codon context) is a species specific gene primary structure feature whose evolutio...
Codon pair usage (codon context) is a species specific gene primary structure feature whose evolutio...
Organisms construct proteins out of individual amino acids using instructions encoded in the nucleot...
Abstract Background Alternative synonymous codons are not used with equal frequencies. In addition, ...
Here I show that the mean codon usage bias of a genome, and of the lowly expressed genes in a genome...
The genetic codes have degeneracy; that is, most amino acids (18 out of 20 in the universal genetic ...
Background. Codon usage and codon-pair context are important gene primary structure features that in...
The genetic code encodes 20 amino acids using 64 nucleotide triplets or codons. 18 of the 20 amino a...
BACKGROUND: Codon usage and codon-pair context are important gene primary structure features that in...
DNA encodes protein primary structure using 64 different codons to specify 20 different amino acids ...
Codon usage bias plays an important role in the regulation of gene expression. A couple of measures ...
Codon usage bias, where certain codons are used more frequently than their synonymous counterparts, ...
Codon bias in the genome of an organism influences its phenome by changing the speed and efficiency ...
Codon usage and codon-pair context are important gene primary structure features that influence mRNA...
The relationship of nucleotide context on fifteen evolutionarily distinct bacterial species was inve...
Codon pair usage (codon context) is a species specific gene primary structure feature whose evolutio...
Codon pair usage (codon context) is a species specific gene primary structure feature whose evolutio...
Organisms construct proteins out of individual amino acids using instructions encoded in the nucleot...
Abstract Background Alternative synonymous codons are not used with equal frequencies. In addition, ...
Here I show that the mean codon usage bias of a genome, and of the lowly expressed genes in a genome...
The genetic codes have degeneracy; that is, most amino acids (18 out of 20 in the universal genetic ...
Background. Codon usage and codon-pair context are important gene primary structure features that in...
The genetic code encodes 20 amino acids using 64 nucleotide triplets or codons. 18 of the 20 amino a...
BACKGROUND: Codon usage and codon-pair context are important gene primary structure features that in...
DNA encodes protein primary structure using 64 different codons to specify 20 different amino acids ...
Codon usage bias plays an important role in the regulation of gene expression. A couple of measures ...
Codon usage bias, where certain codons are used more frequently than their synonymous counterparts, ...
Codon bias in the genome of an organism influences its phenome by changing the speed and efficiency ...
Codon usage and codon-pair context are important gene primary structure features that influence mRNA...