Abstract—Cutting-edge sequencing systems produce data at a prodigious rate; and the analysis of these datasets requires significant computing resources. Cloud computing provides a tantalizing possibility for on-demand access to computing re-sources. However, many open questions remain. We present here a performance assessment of BLAST on real metagenomics data in a cloud setting, in order to determine the viability of this approach. BLAST is one of the premier applications in bioinformatics and computational biology and is assumed to consume the vast majority of resources in that area. I
A major bottleneck in biological discovery is now emerging at the computational level. Cloud computi...
Cloud-based service computing has started to change the way how research in science, in particular b...
In this paper, we explore the benefits of automatically determining the degree of parallelism used t...
Computational biology applications typically favor a local, cluster-based, integrated computational ...
With the continued exponential expansion of publicly available genomic data and access to low-cost, ...
The widespread popularity of genomic applications is threatened by the "bioinformatics bottleneck" r...
The widespread popularity of genomic applications is threatened by the “bioinformatics bottleneck” r...
Background Comparative genomics resources, such as ortholog detection tools and repositories are rap...
A major bottleneck in biological discovery is now emerging at the computational level. Cloud computi...
<div><p>A major bottleneck in biological discovery is now emerging at the computational level. Cloud...
High-throughput experiments enable researchers to explore complex multifactorial diseases through la...
The number and types of studies about the human microbiome, metagenomics and personalized medicine, ...
Metagenomic studies are becoming increasingly widespread, yielding important insights into microbial...
High-throughput experiments enable researchers to explore complex multifactorial diseases through la...
The combination of the Hadoop MapReduce programming model and cloud computing allows biological scie...
A major bottleneck in biological discovery is now emerging at the computational level. Cloud computi...
Cloud-based service computing has started to change the way how research in science, in particular b...
In this paper, we explore the benefits of automatically determining the degree of parallelism used t...
Computational biology applications typically favor a local, cluster-based, integrated computational ...
With the continued exponential expansion of publicly available genomic data and access to low-cost, ...
The widespread popularity of genomic applications is threatened by the "bioinformatics bottleneck" r...
The widespread popularity of genomic applications is threatened by the “bioinformatics bottleneck” r...
Background Comparative genomics resources, such as ortholog detection tools and repositories are rap...
A major bottleneck in biological discovery is now emerging at the computational level. Cloud computi...
<div><p>A major bottleneck in biological discovery is now emerging at the computational level. Cloud...
High-throughput experiments enable researchers to explore complex multifactorial diseases through la...
The number and types of studies about the human microbiome, metagenomics and personalized medicine, ...
Metagenomic studies are becoming increasingly widespread, yielding important insights into microbial...
High-throughput experiments enable researchers to explore complex multifactorial diseases through la...
The combination of the Hadoop MapReduce programming model and cloud computing allows biological scie...
A major bottleneck in biological discovery is now emerging at the computational level. Cloud computi...
Cloud-based service computing has started to change the way how research in science, in particular b...
In this paper, we explore the benefits of automatically determining the degree of parallelism used t...