Abstract. We have developed a new formulation for fast calculation of far-field force of fast multipole method (FMM)in molecular dynamics simulations. FMM is a linear algorithm to calculate force for molecular dynamics simulations. GRAPE is a special-purpose computer dedicated to Coulombic force calculation. It runs 100-1000 times faster than normal computer at the same price. However FMM cannot be implemented directly on GRAPE. We have succeeded to implement FMM on GRAPE and developed a new formulation for far-field force calculation. Numerical tests show that the performance of FMM using our new formulation on GRAPE is approximately 2-5 times faster than that of FMM using conventional far field formulation. 1
Multipole-based algorithms allow for reduction in the effort required to solve the N - body problem ...
For realistic modeling of materials, a molecular-dynamics (MD) algorithm is developed based on multi...
Solving an N-body problem, electrostatic or gravitational, is a crucial task and the main computatio...
We have implemented the fast multipole method (FMM) on a special-purpose computer GRAPE (GRAvity piP...
We report on a parallel version of the Fast Multipole Method (FMM) implemented in the classical mole...
International audienceWe present an implementation of the fast multipole method for computing Coulom...
Within molecular dynamics simulations of protein–solvent systems the exact evaluation of long-range ...
The approximate computation of all gravitational forces between N interacting particles via the fast...
This thesis describes the Fast Multipole Method (FMM). The method reduces the complexity of the Coul...
AbstractThis paper presents a parallel version of the fast multipole method (FMM). The FMM is a rece...
ABSTRACT: Within molecular dynamics simulations of protein]solvent systems the exact evaluation of l...
An important and computationally demanding part of molecular dynamics simulations is the calculation...
A highly efficient procedure for calculating forces in a molecular dynamics simulation on a vector c...
A significant and computationally most demanding part of molecular dynamics simulations is the calcu...
Petascale molecular dynamics simulation using the fast multipole method on K compute
Multipole-based algorithms allow for reduction in the effort required to solve the N - body problem ...
For realistic modeling of materials, a molecular-dynamics (MD) algorithm is developed based on multi...
Solving an N-body problem, electrostatic or gravitational, is a crucial task and the main computatio...
We have implemented the fast multipole method (FMM) on a special-purpose computer GRAPE (GRAvity piP...
We report on a parallel version of the Fast Multipole Method (FMM) implemented in the classical mole...
International audienceWe present an implementation of the fast multipole method for computing Coulom...
Within molecular dynamics simulations of protein–solvent systems the exact evaluation of long-range ...
The approximate computation of all gravitational forces between N interacting particles via the fast...
This thesis describes the Fast Multipole Method (FMM). The method reduces the complexity of the Coul...
AbstractThis paper presents a parallel version of the fast multipole method (FMM). The FMM is a rece...
ABSTRACT: Within molecular dynamics simulations of protein]solvent systems the exact evaluation of l...
An important and computationally demanding part of molecular dynamics simulations is the calculation...
A highly efficient procedure for calculating forces in a molecular dynamics simulation on a vector c...
A significant and computationally most demanding part of molecular dynamics simulations is the calcu...
Petascale molecular dynamics simulation using the fast multipole method on K compute
Multipole-based algorithms allow for reduction in the effort required to solve the N - body problem ...
For realistic modeling of materials, a molecular-dynamics (MD) algorithm is developed based on multi...
Solving an N-body problem, electrostatic or gravitational, is a crucial task and the main computatio...