Phylogenetic relationships of eublepharid geckos (Reptilia: Squamata): a molecular approach

ABSTRACT—Phylogenetic analyses were carried out for representatives of all eublepharid genera and a few other gekkonoid taxa using sequence data for 879 base pairs of mitochondrial 12S and 16S ribosomal RNA genes. Neighbor-joining (NJ) distance analysis of the data suggested independent great divergences of Coleonyx and Aeluroscalabotes, and monophyly of the remainder within Eublepharidae (bootstrap propor-tion [BP]=76%). Of the latter, the two African genera, Hemitheconyx and Holodactylus, were almost certainly monophyletic altogether (BP=99%), whereas their sister-group relationship with Eublepharis received a weaker, but still substantial support (BP=68%). Within Goniurosaurus kuroiwae, G. k. splendens first diverged from the remainder (BP=100%), followed by G. k. kuroiwae from the northern part of Okinawajima (BP=100%): G. k. kuroiwae from the southern part of Okinawajima and G. k. orientalis, differing from each other at only seven bases, diverged finally (BP=99%). Parsimony analysis yielded results consistent with those of NJ analysis with respect to the monophyly of the two African genera and relationships within G. kuroiwae, but retained the other relationships within Eublepharidae unresolved. Our results, while showing no serious discrepancies with the relationships among eublepharid genera hypothesized from morphological data, cas