Add to ORKGA new statistical method associating each trinucleotide with a frame is developed for identifying circular codes. Its sensibility allows the detection of several circular codes in the (protein coding) genes of archaeal genomes. Several properties of these circular codes are described, in particular the lengths of the minimal windows to retrieve the construction frames, a new definition of a parameter for measuring some probabilities of words generated by the circular codes, and the types of nucleotides in the trinucleotide sites. Some biological consequences are presented in Discussion
During our study of the combinatorial properties of trinucleotide circular codes, we identify a perm...
International audienceRecently, shifted periodicities 1 module 3 and 2 module 3 have been identified...
The presence of circular codes in mRNA coding sequences is postulated to be involved in informationa...
In 1996, a set X of 20 trinucleotides was identified in genes of both prokaryotes and eukaryot...
We develo tion m with the tran the p 4 × 4 and th term trinucleotide pplic common cir en r property ...
A circular code has been identified in the protein (coding) genes of both eukaryotes and prokaryotes...
International audienceBy an extensive statistical analysis in genes of bacteria, archaea, eukaryotes...
A new statistical approach using functions based on the circular code classifies correctly more than...
none3In 1996 Arquès and Michel [1996. A complementary circular code in the protein coding genes. J. ...
International audienceA code X is (≥ k)-circular if any concatenation of at most k words from X, whe...
the frame 0 (reading frame established by the ATG start trinucleotide) of protein (coding) genes of ...
The work done in this thesis presents a new direction for circular code identified in 1996 by analys...
International audienceThe subset X-0,={AAC,AAT,ACC,ATC,ATT,CAG,CTC,CTG,GAA,GAC,GAG,GAT,GCC,GGC,GGT,G...
International audienceThe subset X(q) = {AAC,AAT,ACC,ATC,ATT,CAG,CTC,CTG,GAA,GAC,GAG,GAT,GCC,GGC GGT...
Codes are the sets of words over arbitrary alphabets with the property of unique decipherability. ...
During our study of the combinatorial properties of trinucleotide circular codes, we identify a perm...
International audienceRecently, shifted periodicities 1 module 3 and 2 module 3 have been identified...
The presence of circular codes in mRNA coding sequences is postulated to be involved in informationa...
In 1996, a set X of 20 trinucleotides was identified in genes of both prokaryotes and eukaryot...
We develo tion m with the tran the p 4 × 4 and th term trinucleotide pplic common cir en r property ...
A circular code has been identified in the protein (coding) genes of both eukaryotes and prokaryotes...
International audienceBy an extensive statistical analysis in genes of bacteria, archaea, eukaryotes...
A new statistical approach using functions based on the circular code classifies correctly more than...
none3In 1996 Arquès and Michel [1996. A complementary circular code in the protein coding genes. J. ...
International audienceA code X is (≥ k)-circular if any concatenation of at most k words from X, whe...
the frame 0 (reading frame established by the ATG start trinucleotide) of protein (coding) genes of ...
The work done in this thesis presents a new direction for circular code identified in 1996 by analys...
International audienceThe subset X-0,={AAC,AAT,ACC,ATC,ATT,CAG,CTC,CTG,GAA,GAC,GAG,GAT,GCC,GGC,GGT,G...
International audienceThe subset X(q) = {AAC,AAT,ACC,ATC,ATT,CAG,CTC,CTG,GAA,GAC,GAG,GAT,GCC,GGC GGT...
Codes are the sets of words over arbitrary alphabets with the property of unique decipherability. ...
During our study of the combinatorial properties of trinucleotide circular codes, we identify a perm...
International audienceRecently, shifted periodicities 1 module 3 and 2 module 3 have been identified...
The presence of circular codes in mRNA coding sequences is postulated to be involved in informationa...