A new application of the replica exchange technique is demonstrated for use in reactive Monte Carlo simulations. The technique allows the system to traverse barriers in the free energy landscape through configuration swaps of higher temperature replicas, replicas with scaled potential energy parameters, or replicas existing at modified values of the reaction driving force (free energy of reaction). Acceptance rules are derived for the swap moves among the replicas, and the application of the replica exchange method is shown to be straightforward. We demonstrate the accuracy and efficiency of this technique by simulating the conversion of a model reaction. We find large increases in efficiency when performing simulations at computationally c...
The ability of grand canonical Monte Carlo (GCMC) to create and annihilate molecules in a given regi...
Transition path sampling (TPS) was developed for studying activated processes in complex systems wit...
International audienceA method to generate reactive trajectories, namely equilibrium trajectories le...
We developed a replica exchange method that is effectively parallelizable even if the computational ...
We have devised a systematic approach to converge a replica exchange molecular dynamics simulation b...
A replica exchange method is presented which requires fewer replicas and is designed to be used for ...
Replica exchange is a powerful simulation method in which simulations are run at a series of tempera...
We address the question of constructing a protocol for replica-exchange molecular dynamics (REMD) si...
AbstractTwo new methods of replica-exchange method (REM) are tested for a two-dimensional Ising spin...
We sketch the statistical physics framework of the replica exchange technique when applied to molecu...
We sketch the statistical physics framework of the replica exchange technique when applied to molecu...
Parallel tempering, also known as replica exchange Monte Carlo, is studied in the context of two sim...
Replica Exchange (RE) simulations have emerged as an important algorithmic tool for the molecular s...
AbstractWe recently introduced a novel replica-exchange scheme in which an individual replica can sa...
We study the dynamics of parallel tempering simulations, also known as the replica exchange techniqu...
The ability of grand canonical Monte Carlo (GCMC) to create and annihilate molecules in a given regi...
Transition path sampling (TPS) was developed for studying activated processes in complex systems wit...
International audienceA method to generate reactive trajectories, namely equilibrium trajectories le...
We developed a replica exchange method that is effectively parallelizable even if the computational ...
We have devised a systematic approach to converge a replica exchange molecular dynamics simulation b...
A replica exchange method is presented which requires fewer replicas and is designed to be used for ...
Replica exchange is a powerful simulation method in which simulations are run at a series of tempera...
We address the question of constructing a protocol for replica-exchange molecular dynamics (REMD) si...
AbstractTwo new methods of replica-exchange method (REM) are tested for a two-dimensional Ising spin...
We sketch the statistical physics framework of the replica exchange technique when applied to molecu...
We sketch the statistical physics framework of the replica exchange technique when applied to molecu...
Parallel tempering, also known as replica exchange Monte Carlo, is studied in the context of two sim...
Replica Exchange (RE) simulations have emerged as an important algorithmic tool for the molecular s...
AbstractWe recently introduced a novel replica-exchange scheme in which an individual replica can sa...
We study the dynamics of parallel tempering simulations, also known as the replica exchange techniqu...
The ability of grand canonical Monte Carlo (GCMC) to create and annihilate molecules in a given regi...
Transition path sampling (TPS) was developed for studying activated processes in complex systems wit...
International audienceA method to generate reactive trajectories, namely equilibrium trajectories le...